Historical Contingency in Microbial Resilience to Hydrologic Perturbations

Development of reliable biogeochemical models requires a mechanistic consideration of microbial interactions with hydrology. Microbial response to and its recovery after hydrologic perturbations (i.e., resilience) is a critical component to understand in this regard, but generally difficult to predi...

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Main Authors: Hyun-Seob Song, James C. Stegen, Emily B. Graham, Timothy D. Scheibe
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-02-01
Series:Frontiers in Water
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/frwa.2021.590378/full
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spelling doaj-5702d426685c4137b6d2eec498ecb0cd2021-04-02T20:31:38ZengFrontiers Media S.A.Frontiers in Water2624-93752021-02-01310.3389/frwa.2021.590378590378Historical Contingency in Microbial Resilience to Hydrologic PerturbationsHyun-Seob Song0Hyun-Seob Song1Hyun-Seob Song2James C. Stegen3Emily B. Graham4Emily B. Graham5Timothy D. Scheibe6Earth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, United StatesDepartment of Biological Systems Engineering, University of Nebraska-Lincoln, Lincoln, NE, United StatesDepartment of Food Science and Technology, Nebraska Food for Health Center, University of Nebraska-Lincoln, Lincoln, NE, United StatesEarth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, United StatesEarth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, United StatesSchool of Biological Sciences, Washington State University, Pullman, WA, United StatesEarth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, United StatesDevelopment of reliable biogeochemical models requires a mechanistic consideration of microbial interactions with hydrology. Microbial response to and its recovery after hydrologic perturbations (i.e., resilience) is a critical component to understand in this regard, but generally difficult to predict because the impacts of future events can be dependent on the history of perturbations (i.e., historical contingency). Fundamental issues underlying this phenomenon include how microbial resilience to hydrologic perturbations is influenced by historical contingency and how their relationships vary depending on the characteristics of microbial functions. To answer these questions, we considered a simple microbial community composed of two species that redundantly consume a common substrate but specialize in producing distinct products and developed a continuous flow reactor model where the two species grow with trade-offs along the flow rate. Simulations of this model revealed that (1) the history of hydrologic perturbations can lead to the shifts in microbial populations, which consequently affect the community's functional dynamics, and (2) while historical contingency in resilience was consistently predicted for all microbial functions, it was more pronounced for specialized functions, compared to the redundant function. As a signature of historical contingency, our model also predicted the emergence of hysteresis in the transitions across conditions, a critical aspect that can affect transient formation of intermediate compounds in biogeochemistry. This work presents microbial growth traits and their functional redundancy or specialization as fundamental factors that control historical contingencies in resilience.https://www.frontiersin.org/articles/10.3389/frwa.2021.590378/fullmicrobial communitieshysteresistrade-offstrait-based modelingco-existencebiogeochemistry
collection DOAJ
language English
format Article
sources DOAJ
author Hyun-Seob Song
Hyun-Seob Song
Hyun-Seob Song
James C. Stegen
Emily B. Graham
Emily B. Graham
Timothy D. Scheibe
spellingShingle Hyun-Seob Song
Hyun-Seob Song
Hyun-Seob Song
James C. Stegen
Emily B. Graham
Emily B. Graham
Timothy D. Scheibe
Historical Contingency in Microbial Resilience to Hydrologic Perturbations
Frontiers in Water
microbial communities
hysteresis
trade-offs
trait-based modeling
co-existence
biogeochemistry
author_facet Hyun-Seob Song
Hyun-Seob Song
Hyun-Seob Song
James C. Stegen
Emily B. Graham
Emily B. Graham
Timothy D. Scheibe
author_sort Hyun-Seob Song
title Historical Contingency in Microbial Resilience to Hydrologic Perturbations
title_short Historical Contingency in Microbial Resilience to Hydrologic Perturbations
title_full Historical Contingency in Microbial Resilience to Hydrologic Perturbations
title_fullStr Historical Contingency in Microbial Resilience to Hydrologic Perturbations
title_full_unstemmed Historical Contingency in Microbial Resilience to Hydrologic Perturbations
title_sort historical contingency in microbial resilience to hydrologic perturbations
publisher Frontiers Media S.A.
series Frontiers in Water
issn 2624-9375
publishDate 2021-02-01
description Development of reliable biogeochemical models requires a mechanistic consideration of microbial interactions with hydrology. Microbial response to and its recovery after hydrologic perturbations (i.e., resilience) is a critical component to understand in this regard, but generally difficult to predict because the impacts of future events can be dependent on the history of perturbations (i.e., historical contingency). Fundamental issues underlying this phenomenon include how microbial resilience to hydrologic perturbations is influenced by historical contingency and how their relationships vary depending on the characteristics of microbial functions. To answer these questions, we considered a simple microbial community composed of two species that redundantly consume a common substrate but specialize in producing distinct products and developed a continuous flow reactor model where the two species grow with trade-offs along the flow rate. Simulations of this model revealed that (1) the history of hydrologic perturbations can lead to the shifts in microbial populations, which consequently affect the community's functional dynamics, and (2) while historical contingency in resilience was consistently predicted for all microbial functions, it was more pronounced for specialized functions, compared to the redundant function. As a signature of historical contingency, our model also predicted the emergence of hysteresis in the transitions across conditions, a critical aspect that can affect transient formation of intermediate compounds in biogeochemistry. This work presents microbial growth traits and their functional redundancy or specialization as fundamental factors that control historical contingencies in resilience.
topic microbial communities
hysteresis
trade-offs
trait-based modeling
co-existence
biogeochemistry
url https://www.frontiersin.org/articles/10.3389/frwa.2021.590378/full
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