SNOMED CT-Based Standardized e-Clinical Pathways for Enabling Big Data Analytics in Healthcare

Automation of healthcare facilities represents a challenging task of streamlining a highly information-intensive sector. Modern healthcare processes produce large amounts of data that have great potential for health policymakers and data science researchers. However, a considerable portion of such d...

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Main Authors: Ayman D. Alahmar, Rachid Benlamri
Format: Article
Language:English
Published: IEEE 2020-01-01
Series:IEEE Access
Subjects:
Online Access:https://ieeexplore.ieee.org/document/9093006/
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spelling doaj-56cb1fa7459047d08b72fc5bc12bbc422021-03-30T01:34:03ZengIEEEIEEE Access2169-35362020-01-018927659277510.1109/ACCESS.2020.29942869093006SNOMED CT-Based Standardized e-Clinical Pathways for Enabling Big Data Analytics in HealthcareAyman D. Alahmar0https://orcid.org/0000-0003-4011-1023Rachid Benlamri1Department of Software Engineering, Lakehead University, Thunder Bay, ON, CanadaDepartment of Software Engineering, Lakehead University, Thunder Bay, ON, CanadaAutomation of healthcare facilities represents a challenging task of streamlining a highly information-intensive sector. Modern healthcare processes produce large amounts of data that have great potential for health policymakers and data science researchers. However, a considerable portion of such data is not captured in electronic format and hidden inside the paperwork. A major source of missing data in healthcare is paper-based clinical pathways (CPs). CPs are healthcare plans that detail the interventions for the treatment of patients, and thus are the primary source for healthcare data. However, most CPs are used as paper-based documents and not fully automated. A key contribution towards the full automation of CPs is their proper computer modeling and encoding their data with international clinical terminologies. We present in this research an ontology-based CP automation model in which CP data are standardized with SNOMED CT, thus enabling machine learning algorithms to be applied to CP-based datasets. CPs automated under this model contribute significantly to reducing data missingness problems, enabling detailed statistical analyses on CP data, and improving the results of data analytics algorithms. Our experimental results on predicting the Length of Stay (LOS) of stroke patients using a dataset resulting from an e-clinical pathway demonstrate improved prediction results compared with LOS prediction using traditional EHR-based datasets. Fully automated CPs enrich medical datasets with more CP data and open new opportunities for machine learning algorithms to show their full potential in improving healthcare, reducing costs, and increasing patient satisfaction.https://ieeexplore.ieee.org/document/9093006/Clinical pathwaydata analyticsdecision treehealth level 7length of staymachine learning
collection DOAJ
language English
format Article
sources DOAJ
author Ayman D. Alahmar
Rachid Benlamri
spellingShingle Ayman D. Alahmar
Rachid Benlamri
SNOMED CT-Based Standardized e-Clinical Pathways for Enabling Big Data Analytics in Healthcare
IEEE Access
Clinical pathway
data analytics
decision tree
health level 7
length of stay
machine learning
author_facet Ayman D. Alahmar
Rachid Benlamri
author_sort Ayman D. Alahmar
title SNOMED CT-Based Standardized e-Clinical Pathways for Enabling Big Data Analytics in Healthcare
title_short SNOMED CT-Based Standardized e-Clinical Pathways for Enabling Big Data Analytics in Healthcare
title_full SNOMED CT-Based Standardized e-Clinical Pathways for Enabling Big Data Analytics in Healthcare
title_fullStr SNOMED CT-Based Standardized e-Clinical Pathways for Enabling Big Data Analytics in Healthcare
title_full_unstemmed SNOMED CT-Based Standardized e-Clinical Pathways for Enabling Big Data Analytics in Healthcare
title_sort snomed ct-based standardized e-clinical pathways for enabling big data analytics in healthcare
publisher IEEE
series IEEE Access
issn 2169-3536
publishDate 2020-01-01
description Automation of healthcare facilities represents a challenging task of streamlining a highly information-intensive sector. Modern healthcare processes produce large amounts of data that have great potential for health policymakers and data science researchers. However, a considerable portion of such data is not captured in electronic format and hidden inside the paperwork. A major source of missing data in healthcare is paper-based clinical pathways (CPs). CPs are healthcare plans that detail the interventions for the treatment of patients, and thus are the primary source for healthcare data. However, most CPs are used as paper-based documents and not fully automated. A key contribution towards the full automation of CPs is their proper computer modeling and encoding their data with international clinical terminologies. We present in this research an ontology-based CP automation model in which CP data are standardized with SNOMED CT, thus enabling machine learning algorithms to be applied to CP-based datasets. CPs automated under this model contribute significantly to reducing data missingness problems, enabling detailed statistical analyses on CP data, and improving the results of data analytics algorithms. Our experimental results on predicting the Length of Stay (LOS) of stroke patients using a dataset resulting from an e-clinical pathway demonstrate improved prediction results compared with LOS prediction using traditional EHR-based datasets. Fully automated CPs enrich medical datasets with more CP data and open new opportunities for machine learning algorithms to show their full potential in improving healthcare, reducing costs, and increasing patient satisfaction.
topic Clinical pathway
data analytics
decision tree
health level 7
length of stay
machine learning
url https://ieeexplore.ieee.org/document/9093006/
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