m6A mRNA methylation regulates CTNNB1 to promote the proliferation of hepatoblastoma

Abstract Background N6-Methyladenosine (m6A) modification has been implicated in many biological processes. It is important for the regulation of messenger RNA (mRNA) stability, splicing, and translation. However, its role in cancer has not been studied in detail. Here we investigated the biological...

Full description

Bibliographic Details
Main Authors: Li Liu, Jing Wang, Guifeng Sun, Qiong Wu, Ji Ma, Xin Zhang, Nan Huang, Zhixuan Bian, Song Gu, Min Xu, Minzhi Yin, Fenyong Sun, Qiuhui Pan
Format: Article
Language:English
Published: BMC 2019-12-01
Series:Molecular Cancer
Subjects:
Online Access:https://doi.org/10.1186/s12943-019-1119-7
id doaj-56bc649ea58440eba44ac8ef4d6af0ab
record_format Article
spelling doaj-56bc649ea58440eba44ac8ef4d6af0ab2020-12-27T12:10:20ZengBMCMolecular Cancer1476-45982019-12-0118111310.1186/s12943-019-1119-7m6A mRNA methylation regulates CTNNB1 to promote the proliferation of hepatoblastomaLi Liu0Jing Wang1Guifeng Sun2Qiong Wu3Ji Ma4Xin Zhang5Nan Huang6Zhixuan Bian7Song Gu8Min Xu9Minzhi Yin10Fenyong Sun11Qiuhui Pan12Department of Clinical Laboratory Medicine, Shanghai Children’s Medical Center, School of medicine, Shanghai Jiaotong UniversityDepartment of Clinical Laboratory, Shanghai Fourth People’s Hospital affiliated to Tongji University School of MedicineDepartment of Surgery, Shanghai Children’s Medical Center, School of medicine, Shanghai Jiaotong UniversitySchool of Pharmacy, Guangdong Pharmaceutical UniversityDepartment of Clinical Laboratory Medicine, Shanghai Children’s Medical Center, School of medicine, Shanghai Jiaotong UniversityDepartment of Clinical Laboratory Medicine, Shanghai Children’s Medical Center, School of medicine, Shanghai Jiaotong UniversityDepartment of Surgery, Shanghai Children’s Medical Center, School of medicine, Shanghai Jiaotong UniversityDepartment of Clinical Laboratory Medicine, Shanghai Children’s Medical Center, School of medicine, Shanghai Jiaotong UniversityDepartment of Clinical Laboratory, Shanghai Fourth People’s Hospital affiliated to Tongji University School of MedicineDepartment of Clinical Laboratory, Shanghai Fourth People’s Hospital affiliated to Tongji University School of MedicineDepartment of Pathology, Shanghai Children’s Medical Center, School of medicine, Shanghai Jiaotong UniversityDepartment of Surgery, Shanghai Children’s Medical Center, School of medicine, Shanghai Jiaotong UniversityDepartment of Clinical Laboratory Medicine, Shanghai Children’s Medical Center, School of medicine, Shanghai Jiaotong UniversityAbstract Background N6-Methyladenosine (m6A) modification has been implicated in many biological processes. It is important for the regulation of messenger RNA (mRNA) stability, splicing, and translation. However, its role in cancer has not been studied in detail. Here we investigated the biological role and underlying mechanism of m6A modification in hepatoblastoma (HB). Methods We used Reverse transcription quantitative real-time PCR (RT-qPCR) and Western blotting to determine the expression of m6A related factors. And we clarified the effects of these factors on HB cells using cell proliferation assay, colony formation, apoptotic assay. Then we investigated of methyltransferase-like 13 (METTL3) and its correlation with clinicopathological features and used xenograft experiment to check METTL3 effect in vivo. m6A-Seq was used to profiled m6A transcriptome-wide in hepatoblastoma tumor tissue and normal tissue. Finally, methylated RNA immunoprecipitation (MeRIP) assay, RNA remaining assay to perform the regulator mechanism of MEETL3 on the target CTNNB1 in HB. Results In this research, we discovered that m6A modifications are increased in hepatoblastoma, and METTL3 is the main factor involved with aberrant m6A modification. We also profiled m6A across the whole transcriptome in hepatoblastoma tumor tissues and normal tissues. Our findings suggest that m6A is highly expressed in hepatoblastoma tumors. Also, m6A is enriched not only around the stop codon, but also around the coding sequence (CDS) region. Gene ontology analysis indicates that m6A mRNA methylation contributes significantly to regulate the Wnt/β-catenin pathway. Reduced m6A methylation can lead to a decrease in expression and stability of the CTNNB1. Conclusion Overall our findings suggest enhanced m6A mRNA methylation as an oncogenic mechanism in hepatoblastoma, METTL3 is significantly up-regulated in HB and promotes HB development. And identify CTNNB1 as a regulator of METTL3 guided m6A modification in HB.https://doi.org/10.1186/s12943-019-1119-7RNA m6A methylationWnt/β-catenin pathwayCTNNB1HepatoblastomaMETTL3
collection DOAJ
language English
format Article
sources DOAJ
author Li Liu
Jing Wang
Guifeng Sun
Qiong Wu
Ji Ma
Xin Zhang
Nan Huang
Zhixuan Bian
Song Gu
Min Xu
Minzhi Yin
Fenyong Sun
Qiuhui Pan
spellingShingle Li Liu
Jing Wang
Guifeng Sun
Qiong Wu
Ji Ma
Xin Zhang
Nan Huang
Zhixuan Bian
Song Gu
Min Xu
Minzhi Yin
Fenyong Sun
Qiuhui Pan
m6A mRNA methylation regulates CTNNB1 to promote the proliferation of hepatoblastoma
Molecular Cancer
RNA m6A methylation
Wnt/β-catenin pathway
CTNNB1
Hepatoblastoma
METTL3
author_facet Li Liu
Jing Wang
Guifeng Sun
Qiong Wu
Ji Ma
Xin Zhang
Nan Huang
Zhixuan Bian
Song Gu
Min Xu
Minzhi Yin
Fenyong Sun
Qiuhui Pan
author_sort Li Liu
title m6A mRNA methylation regulates CTNNB1 to promote the proliferation of hepatoblastoma
title_short m6A mRNA methylation regulates CTNNB1 to promote the proliferation of hepatoblastoma
title_full m6A mRNA methylation regulates CTNNB1 to promote the proliferation of hepatoblastoma
title_fullStr m6A mRNA methylation regulates CTNNB1 to promote the proliferation of hepatoblastoma
title_full_unstemmed m6A mRNA methylation regulates CTNNB1 to promote the proliferation of hepatoblastoma
title_sort m6a mrna methylation regulates ctnnb1 to promote the proliferation of hepatoblastoma
publisher BMC
series Molecular Cancer
issn 1476-4598
publishDate 2019-12-01
description Abstract Background N6-Methyladenosine (m6A) modification has been implicated in many biological processes. It is important for the regulation of messenger RNA (mRNA) stability, splicing, and translation. However, its role in cancer has not been studied in detail. Here we investigated the biological role and underlying mechanism of m6A modification in hepatoblastoma (HB). Methods We used Reverse transcription quantitative real-time PCR (RT-qPCR) and Western blotting to determine the expression of m6A related factors. And we clarified the effects of these factors on HB cells using cell proliferation assay, colony formation, apoptotic assay. Then we investigated of methyltransferase-like 13 (METTL3) and its correlation with clinicopathological features and used xenograft experiment to check METTL3 effect in vivo. m6A-Seq was used to profiled m6A transcriptome-wide in hepatoblastoma tumor tissue and normal tissue. Finally, methylated RNA immunoprecipitation (MeRIP) assay, RNA remaining assay to perform the regulator mechanism of MEETL3 on the target CTNNB1 in HB. Results In this research, we discovered that m6A modifications are increased in hepatoblastoma, and METTL3 is the main factor involved with aberrant m6A modification. We also profiled m6A across the whole transcriptome in hepatoblastoma tumor tissues and normal tissues. Our findings suggest that m6A is highly expressed in hepatoblastoma tumors. Also, m6A is enriched not only around the stop codon, but also around the coding sequence (CDS) region. Gene ontology analysis indicates that m6A mRNA methylation contributes significantly to regulate the Wnt/β-catenin pathway. Reduced m6A methylation can lead to a decrease in expression and stability of the CTNNB1. Conclusion Overall our findings suggest enhanced m6A mRNA methylation as an oncogenic mechanism in hepatoblastoma, METTL3 is significantly up-regulated in HB and promotes HB development. And identify CTNNB1 as a regulator of METTL3 guided m6A modification in HB.
topic RNA m6A methylation
Wnt/β-catenin pathway
CTNNB1
Hepatoblastoma
METTL3
url https://doi.org/10.1186/s12943-019-1119-7
work_keys_str_mv AT liliu m6amrnamethylationregulatesctnnb1topromotetheproliferationofhepatoblastoma
AT jingwang m6amrnamethylationregulatesctnnb1topromotetheproliferationofhepatoblastoma
AT guifengsun m6amrnamethylationregulatesctnnb1topromotetheproliferationofhepatoblastoma
AT qiongwu m6amrnamethylationregulatesctnnb1topromotetheproliferationofhepatoblastoma
AT jima m6amrnamethylationregulatesctnnb1topromotetheproliferationofhepatoblastoma
AT xinzhang m6amrnamethylationregulatesctnnb1topromotetheproliferationofhepatoblastoma
AT nanhuang m6amrnamethylationregulatesctnnb1topromotetheproliferationofhepatoblastoma
AT zhixuanbian m6amrnamethylationregulatesctnnb1topromotetheproliferationofhepatoblastoma
AT songgu m6amrnamethylationregulatesctnnb1topromotetheproliferationofhepatoblastoma
AT minxu m6amrnamethylationregulatesctnnb1topromotetheproliferationofhepatoblastoma
AT minzhiyin m6amrnamethylationregulatesctnnb1topromotetheproliferationofhepatoblastoma
AT fenyongsun m6amrnamethylationregulatesctnnb1topromotetheproliferationofhepatoblastoma
AT qiuhuipan m6amrnamethylationregulatesctnnb1topromotetheproliferationofhepatoblastoma
_version_ 1724369296536109056