Investigation of blaKPC Gene by PCR in Carbapenem-Resistant Escherichia coli and Klebsiella pneumoniae Clinical Isolates in a Tertiary Care Hospital in Turkey

Introduction: One of the most common mechanisms in the development of carbapenem resistance is acquiring carbapenemases. A new and different carbapenemase, Klebsiella pneumoniae carbapenemase (KPC), has recently emerged in Turkey. Klebsiella pneumoniae carbapenemases are encoded by the blaKPC gene...

Full description

Bibliographic Details
Main Authors: Gonca ÖZYAZICI, Esra ÖZKAYA, Havva KAYA, Sabriye KOCATÜRK SEL, Hasan ALTINBAŞAK, Fesem BAŞARI, Bedia Mutay SUNTUR, Celal Kurtuluş BURUK
Format: Article
Language:Turkish
Published: Galenos Yayinevi 2019-12-01
Series:Mediterranean Journal of Infection, Microbes and Antimicrobials
Subjects:
Online Access:http://mjima.org/text.php?&id=155
id doaj-550c98735cba47dbbe25e671976838d8
record_format Article
spelling doaj-550c98735cba47dbbe25e671976838d82020-11-25T03:55:08ZturGalenos YayineviMediterranean Journal of Infection, Microbes and Antimicrobials2147-673X2019-12-01810.4274/mjima.galenos.2019.2019.3Investigation of blaKPC Gene by PCR in Carbapenem-Resistant Escherichia coli and Klebsiella pneumoniae Clinical Isolates in a Tertiary Care Hospital in TurkeyGonca ÖZYAZICI0Esra ÖZKAYA1https://orcid.org/0000-0003-1673-9101Havva KAYA2https://orcid.org/0000-0002-3497-0545Sabriye KOCATÜRK SEL3https://orcid.org/0000-0003-2446-0979Hasan ALTINBAŞAK4https://orcid.org/0000-0001-6504-511XFesem BAŞARI5https://orcid.org/0000-0002-2675-0630Bedia Mutay SUNTUR6https://orcid.org/0000-0003-4732-1664Celal Kurtuluş BURUK7https://orcid.org/0000-0001-8497-5419Adana City Hospital, Laboratory of Microbiology, Adana, TurkeyKaradeniz Technical University Faculty of Medicine, Department of Medical Microbiology, Trabzon, TurkeyAdana City Hospital, Clinic of Infectious Diseases and Clinical Microbiology, Adana, TurkeyÇukurova University Faculty of Medicine, Department of Medical Biology and Genetics, Adana, TurkeyÇukurova University Institute of Sciences, Department of Biotechnology, Adana, TurkeyÇukurova University Institute of Sciences, Department of Biotechnology, Adana, TurkeyAdana City Hospital, Clinic of Infectious Diseases and Clinical Microbiology, Adana, TurkeyKaradeniz Technical University Faculty of Medicine, Department of Medical Microbiology, Trabzon, TurkeyIntroduction: One of the most common mechanisms in the development of carbapenem resistance is acquiring carbapenemases. A new and different carbapenemase, Klebsiella pneumoniae carbapenemase (KPC), has recently emerged in Turkey. Klebsiella pneumoniae carbapenemases are encoded by the blaKPC gene and can be transferred between different species. Reports showing the presence of blaKPC gene in isolates from Turkey are limited. The current study aimed to investigate the presence of blaKPC gene in carbapenem resistant K. pneumoniae and Escherichia coli isolates in a tertiary care hospital in Turkey. Materials and Methods: Patient samples from various clinical units in Adana Numune Training and Research Hospital between November 2013 and October 2014 were sent to our laboratory at the same hospital. K. pneumoniae and E. coli strains isolated from different clinical samples were identified using both conventional methods and the VITEK® 2.0 automated identification system (bioMérieux, France). Imipenem-cilastatin, meropenem, and ertapenem susceptibility was analyzed using a VITEK® 2.0 antibiotic susceptibility testing system (bioMérieux, France). The presence of blaKPC gene was investigated by polymerase chain reaction. Results: A total of 49 resistant K. pneumoniae and 33 E. coli isolates were included in the study. Most were isolated from urine specimens. Among the carbapenems we tested, highest resistance rates were to ertapenem (98.0% in K. pneumoniae and 84.8% in E. coli isolates). One K. pneumoniae isolate was found positive for the blaKPC gene. Conclusion: According to our literature survey, this study is among the first reports from Turkey presenting the isolation of KPC-producing K. pneumoniae. This finding indicates the need to monitor carbapenem resistance arising from blaKPC, which may spread horizontally. Moreover, surveillance of antibiotic sensitivity rates and observation of regional differences will be useful guidelines in determining infection control and antimicrobial use management policies.http://mjima.org/text.php?&id=155carbapenemaseblakpc genemolecular epidemiologyurinary tract infectionmodified hodge test
collection DOAJ
language Turkish
format Article
sources DOAJ
author Gonca ÖZYAZICI
Esra ÖZKAYA
Havva KAYA
Sabriye KOCATÜRK SEL
Hasan ALTINBAŞAK
Fesem BAŞARI
Bedia Mutay SUNTUR
Celal Kurtuluş BURUK
spellingShingle Gonca ÖZYAZICI
Esra ÖZKAYA
Havva KAYA
Sabriye KOCATÜRK SEL
Hasan ALTINBAŞAK
Fesem BAŞARI
Bedia Mutay SUNTUR
Celal Kurtuluş BURUK
Investigation of blaKPC Gene by PCR in Carbapenem-Resistant Escherichia coli and Klebsiella pneumoniae Clinical Isolates in a Tertiary Care Hospital in Turkey
Mediterranean Journal of Infection, Microbes and Antimicrobials
carbapenemase
blakpc gene
molecular epidemiology
urinary tract infection
modified hodge test
author_facet Gonca ÖZYAZICI
Esra ÖZKAYA
Havva KAYA
Sabriye KOCATÜRK SEL
Hasan ALTINBAŞAK
Fesem BAŞARI
Bedia Mutay SUNTUR
Celal Kurtuluş BURUK
author_sort Gonca ÖZYAZICI
title Investigation of blaKPC Gene by PCR in Carbapenem-Resistant Escherichia coli and Klebsiella pneumoniae Clinical Isolates in a Tertiary Care Hospital in Turkey
title_short Investigation of blaKPC Gene by PCR in Carbapenem-Resistant Escherichia coli and Klebsiella pneumoniae Clinical Isolates in a Tertiary Care Hospital in Turkey
title_full Investigation of blaKPC Gene by PCR in Carbapenem-Resistant Escherichia coli and Klebsiella pneumoniae Clinical Isolates in a Tertiary Care Hospital in Turkey
title_fullStr Investigation of blaKPC Gene by PCR in Carbapenem-Resistant Escherichia coli and Klebsiella pneumoniae Clinical Isolates in a Tertiary Care Hospital in Turkey
title_full_unstemmed Investigation of blaKPC Gene by PCR in Carbapenem-Resistant Escherichia coli and Klebsiella pneumoniae Clinical Isolates in a Tertiary Care Hospital in Turkey
title_sort investigation of blakpc gene by pcr in carbapenem-resistant escherichia coli and klebsiella pneumoniae clinical isolates in a tertiary care hospital in turkey
publisher Galenos Yayinevi
series Mediterranean Journal of Infection, Microbes and Antimicrobials
issn 2147-673X
publishDate 2019-12-01
description Introduction: One of the most common mechanisms in the development of carbapenem resistance is acquiring carbapenemases. A new and different carbapenemase, Klebsiella pneumoniae carbapenemase (KPC), has recently emerged in Turkey. Klebsiella pneumoniae carbapenemases are encoded by the blaKPC gene and can be transferred between different species. Reports showing the presence of blaKPC gene in isolates from Turkey are limited. The current study aimed to investigate the presence of blaKPC gene in carbapenem resistant K. pneumoniae and Escherichia coli isolates in a tertiary care hospital in Turkey. Materials and Methods: Patient samples from various clinical units in Adana Numune Training and Research Hospital between November 2013 and October 2014 were sent to our laboratory at the same hospital. K. pneumoniae and E. coli strains isolated from different clinical samples were identified using both conventional methods and the VITEK® 2.0 automated identification system (bioMérieux, France). Imipenem-cilastatin, meropenem, and ertapenem susceptibility was analyzed using a VITEK® 2.0 antibiotic susceptibility testing system (bioMérieux, France). The presence of blaKPC gene was investigated by polymerase chain reaction. Results: A total of 49 resistant K. pneumoniae and 33 E. coli isolates were included in the study. Most were isolated from urine specimens. Among the carbapenems we tested, highest resistance rates were to ertapenem (98.0% in K. pneumoniae and 84.8% in E. coli isolates). One K. pneumoniae isolate was found positive for the blaKPC gene. Conclusion: According to our literature survey, this study is among the first reports from Turkey presenting the isolation of KPC-producing K. pneumoniae. This finding indicates the need to monitor carbapenem resistance arising from blaKPC, which may spread horizontally. Moreover, surveillance of antibiotic sensitivity rates and observation of regional differences will be useful guidelines in determining infection control and antimicrobial use management policies.
topic carbapenemase
blakpc gene
molecular epidemiology
urinary tract infection
modified hodge test
url http://mjima.org/text.php?&id=155
work_keys_str_mv AT goncaozyazici investigationofblakpcgenebypcrincarbapenemresistantescherichiacoliandklebsiellapneumoniaeclinicalisolatesinatertiarycarehospitalinturkey
AT esraozkaya investigationofblakpcgenebypcrincarbapenemresistantescherichiacoliandklebsiellapneumoniaeclinicalisolatesinatertiarycarehospitalinturkey
AT havvakaya investigationofblakpcgenebypcrincarbapenemresistantescherichiacoliandklebsiellapneumoniaeclinicalisolatesinatertiarycarehospitalinturkey
AT sabriyekocaturksel investigationofblakpcgenebypcrincarbapenemresistantescherichiacoliandklebsiellapneumoniaeclinicalisolatesinatertiarycarehospitalinturkey
AT hasanaltinbasak investigationofblakpcgenebypcrincarbapenemresistantescherichiacoliandklebsiellapneumoniaeclinicalisolatesinatertiarycarehospitalinturkey
AT fesembasari investigationofblakpcgenebypcrincarbapenemresistantescherichiacoliandklebsiellapneumoniaeclinicalisolatesinatertiarycarehospitalinturkey
AT bediamutaysuntur investigationofblakpcgenebypcrincarbapenemresistantescherichiacoliandklebsiellapneumoniaeclinicalisolatesinatertiarycarehospitalinturkey
AT celalkurtulusburuk investigationofblakpcgenebypcrincarbapenemresistantescherichiacoliandklebsiellapneumoniaeclinicalisolatesinatertiarycarehospitalinturkey
_version_ 1724470606541357056