A Unified Framework for Brain Segmentation in MR Images

Brain MRI segmentation is an important issue for discovering the brain structure and diagnosis of subtle anatomical changes in different brain diseases. However, due to several artifacts brain tissue segmentation remains a challenging task. The aim of this paper is to improve the automatic segmentat...

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Main Authors: S. Yazdani, R. Yusof, A. Karimian, A. H. Riazi, M. Bennamoun
Format: Article
Language:English
Published: Hindawi Limited 2015-01-01
Series:Computational and Mathematical Methods in Medicine
Online Access:http://dx.doi.org/10.1155/2015/829893
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spelling doaj-54906eec8d9043fd8dad6046b311392f2020-11-24T22:57:05ZengHindawi LimitedComputational and Mathematical Methods in Medicine1748-670X1748-67182015-01-01201510.1155/2015/829893829893A Unified Framework for Brain Segmentation in MR ImagesS. Yazdani0R. Yusof1A. Karimian2A. H. Riazi3M. Bennamoun4Malaysia-Japan International Institute of Technology (MJIIT), Universiti Teknologi Malaysia, 54100 Jalan Semarak, Kuala Lumpur, MalaysiaMalaysia-Japan International Institute of Technology (MJIIT), Universiti Teknologi Malaysia, 54100 Jalan Semarak, Kuala Lumpur, MalaysiaDepartment of Biomedical Engineering, Faculty of Engineering, University of Isfahan, Isfahan 81745, IranControl and Intelligent Processing Center of Excellence, School of Electrical and Computer Engineering, University College of Engineering, University of Tehran, Tehran 14174, IranSchool of Computer Science and Software Engineering, The University of Western Australia, Perth, WA 6907, AustraliaBrain MRI segmentation is an important issue for discovering the brain structure and diagnosis of subtle anatomical changes in different brain diseases. However, due to several artifacts brain tissue segmentation remains a challenging task. The aim of this paper is to improve the automatic segmentation of brain into gray matter, white matter, and cerebrospinal fluid in magnetic resonance images (MRI). We proposed an automatic hybrid image segmentation method that integrates the modified statistical expectation-maximization (EM) method and the spatial information combined with support vector machine (SVM). The combined method has more accurate results than what can be achieved with its individual techniques that is demonstrated through experiments on both real data and simulated images. Experiments are carried out on both synthetic and real MRI. The results of proposed technique are evaluated against manual segmentation results and other methods based on real T1-weighted scans from Internet Brain Segmentation Repository (IBSR) and simulated images from BrainWeb. The Kappa index is calculated to assess the performance of the proposed framework relative to the ground truth and expert segmentations. The results demonstrate that the proposed combined method has satisfactory results on both simulated MRI and real brain datasets.http://dx.doi.org/10.1155/2015/829893
collection DOAJ
language English
format Article
sources DOAJ
author S. Yazdani
R. Yusof
A. Karimian
A. H. Riazi
M. Bennamoun
spellingShingle S. Yazdani
R. Yusof
A. Karimian
A. H. Riazi
M. Bennamoun
A Unified Framework for Brain Segmentation in MR Images
Computational and Mathematical Methods in Medicine
author_facet S. Yazdani
R. Yusof
A. Karimian
A. H. Riazi
M. Bennamoun
author_sort S. Yazdani
title A Unified Framework for Brain Segmentation in MR Images
title_short A Unified Framework for Brain Segmentation in MR Images
title_full A Unified Framework for Brain Segmentation in MR Images
title_fullStr A Unified Framework for Brain Segmentation in MR Images
title_full_unstemmed A Unified Framework for Brain Segmentation in MR Images
title_sort unified framework for brain segmentation in mr images
publisher Hindawi Limited
series Computational and Mathematical Methods in Medicine
issn 1748-670X
1748-6718
publishDate 2015-01-01
description Brain MRI segmentation is an important issue for discovering the brain structure and diagnosis of subtle anatomical changes in different brain diseases. However, due to several artifacts brain tissue segmentation remains a challenging task. The aim of this paper is to improve the automatic segmentation of brain into gray matter, white matter, and cerebrospinal fluid in magnetic resonance images (MRI). We proposed an automatic hybrid image segmentation method that integrates the modified statistical expectation-maximization (EM) method and the spatial information combined with support vector machine (SVM). The combined method has more accurate results than what can be achieved with its individual techniques that is demonstrated through experiments on both real data and simulated images. Experiments are carried out on both synthetic and real MRI. The results of proposed technique are evaluated against manual segmentation results and other methods based on real T1-weighted scans from Internet Brain Segmentation Repository (IBSR) and simulated images from BrainWeb. The Kappa index is calculated to assess the performance of the proposed framework relative to the ground truth and expert segmentations. The results demonstrate that the proposed combined method has satisfactory results on both simulated MRI and real brain datasets.
url http://dx.doi.org/10.1155/2015/829893
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