Dynamic metabolic modeling of heterotrophic and mixotrophic microalgal growth on fermentative wastes.

Microalgae are promising microorganisms for the production of numerous molecules of interest, such as pigments, proteins or triglycerides that can be turned into biofuels. Heterotrophic or mixotrophic growth on fermentative wastes represents an interesting approach to achieving higher biomass concen...

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Main Authors: Caroline Baroukh, Violette Turon, Olivier Bernard
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2017-06-01
Series:PLoS Computational Biology
Online Access:http://europepmc.org/articles/PMC5476291?pdf=render
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spelling doaj-542f0a9d552d404c902261f3ef2257dd2020-11-25T01:57:43ZengPublic Library of Science (PLoS)PLoS Computational Biology1553-734X1553-73582017-06-01136e100559010.1371/journal.pcbi.1005590Dynamic metabolic modeling of heterotrophic and mixotrophic microalgal growth on fermentative wastes.Caroline BaroukhViolette TuronOlivier BernardMicroalgae are promising microorganisms for the production of numerous molecules of interest, such as pigments, proteins or triglycerides that can be turned into biofuels. Heterotrophic or mixotrophic growth on fermentative wastes represents an interesting approach to achieving higher biomass concentrations, while reducing cost and improving the environmental footprint. Fermentative wastes generally consist of a blend of diverse molecules and it is thus crucial to understand microalgal metabolism in such conditions, where switching between substrates might occur. Metabolic modeling has proven to be an efficient tool for understanding metabolism and guiding the optimization of biomass or target molecule production. Here, we focused on the metabolism of Chlorella sorokiniana growing heterotrophically and mixotrophically on acetate and butyrate. The metabolism was represented by 172 metabolic reactions. The DRUM modeling framework with a mildly relaxed quasi-steady-state assumption was used to account for the switching between substrates and the presence of light. Nine experiments were used to calibrate the model and nine experiments for the validation. The model efficiently predicted the experimental data, including the transient behavior during heterotrophic, autotrophic, mixotrophic and diauxic growth. It shows that an accurate model of metabolism can now be constructed, even in dynamic conditions, with the presence of several carbon substrates. It also opens new perspectives for the heterotrophic and mixotrophic use of microalgae, especially for biofuel production from wastes.http://europepmc.org/articles/PMC5476291?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Caroline Baroukh
Violette Turon
Olivier Bernard
spellingShingle Caroline Baroukh
Violette Turon
Olivier Bernard
Dynamic metabolic modeling of heterotrophic and mixotrophic microalgal growth on fermentative wastes.
PLoS Computational Biology
author_facet Caroline Baroukh
Violette Turon
Olivier Bernard
author_sort Caroline Baroukh
title Dynamic metabolic modeling of heterotrophic and mixotrophic microalgal growth on fermentative wastes.
title_short Dynamic metabolic modeling of heterotrophic and mixotrophic microalgal growth on fermentative wastes.
title_full Dynamic metabolic modeling of heterotrophic and mixotrophic microalgal growth on fermentative wastes.
title_fullStr Dynamic metabolic modeling of heterotrophic and mixotrophic microalgal growth on fermentative wastes.
title_full_unstemmed Dynamic metabolic modeling of heterotrophic and mixotrophic microalgal growth on fermentative wastes.
title_sort dynamic metabolic modeling of heterotrophic and mixotrophic microalgal growth on fermentative wastes.
publisher Public Library of Science (PLoS)
series PLoS Computational Biology
issn 1553-734X
1553-7358
publishDate 2017-06-01
description Microalgae are promising microorganisms for the production of numerous molecules of interest, such as pigments, proteins or triglycerides that can be turned into biofuels. Heterotrophic or mixotrophic growth on fermentative wastes represents an interesting approach to achieving higher biomass concentrations, while reducing cost and improving the environmental footprint. Fermentative wastes generally consist of a blend of diverse molecules and it is thus crucial to understand microalgal metabolism in such conditions, where switching between substrates might occur. Metabolic modeling has proven to be an efficient tool for understanding metabolism and guiding the optimization of biomass or target molecule production. Here, we focused on the metabolism of Chlorella sorokiniana growing heterotrophically and mixotrophically on acetate and butyrate. The metabolism was represented by 172 metabolic reactions. The DRUM modeling framework with a mildly relaxed quasi-steady-state assumption was used to account for the switching between substrates and the presence of light. Nine experiments were used to calibrate the model and nine experiments for the validation. The model efficiently predicted the experimental data, including the transient behavior during heterotrophic, autotrophic, mixotrophic and diauxic growth. It shows that an accurate model of metabolism can now be constructed, even in dynamic conditions, with the presence of several carbon substrates. It also opens new perspectives for the heterotrophic and mixotrophic use of microalgae, especially for biofuel production from wastes.
url http://europepmc.org/articles/PMC5476291?pdf=render
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