Link Prediction through Deep Generative Model

Summary: Inferring missing links based on the currently observed network is known as link prediction, which has tremendous real-world applications in biomedicine, e-commerce, social media, and criminal intelligence. Numerous methods have been proposed to solve the link prediction problem. Yet, many...

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Main Authors: Xu-Wen Wang, Yize Chen, Yang-Yu Liu
Format: Article
Language:English
Published: Elsevier 2020-10-01
Series:iScience
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S258900422030818X
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spelling doaj-53c1c20ff3074ced8fdc1cb75814234a2020-11-25T03:56:00ZengElsevieriScience2589-00422020-10-012310101626Link Prediction through Deep Generative ModelXu-Wen Wang0Yize Chen1Yang-Yu Liu2Channing Division of Network Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USADepartment of Electrical and Computer Engineering, University of Washington, Seattle, WA 98195, USAChanning Division of Network Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA; Corresponding authorSummary: Inferring missing links based on the currently observed network is known as link prediction, which has tremendous real-world applications in biomedicine, e-commerce, social media, and criminal intelligence. Numerous methods have been proposed to solve the link prediction problem. Yet, many of these methods are designed for undirected networks only and based on domain-specific heuristics. Here we developed a new link prediction method based on deep generative models, which does not rely on any domain-specific heuristic and works for general undirected or directed complex networks. Our key idea is to represent the adjacency matrix of a network as an image and then learn hierarchical feature representations of the image by training a deep generative model. Those features correspond to structural patterns in the network at different scales, from small subgraphs to mesoscopic communities. When applied to various real-world networks from different domains, our method shows overall superior performance against existing methods.http://www.sciencedirect.com/science/article/pii/S258900422030818XComplex SystemsNetwork ModelingNetwork Topology
collection DOAJ
language English
format Article
sources DOAJ
author Xu-Wen Wang
Yize Chen
Yang-Yu Liu
spellingShingle Xu-Wen Wang
Yize Chen
Yang-Yu Liu
Link Prediction through Deep Generative Model
iScience
Complex Systems
Network Modeling
Network Topology
author_facet Xu-Wen Wang
Yize Chen
Yang-Yu Liu
author_sort Xu-Wen Wang
title Link Prediction through Deep Generative Model
title_short Link Prediction through Deep Generative Model
title_full Link Prediction through Deep Generative Model
title_fullStr Link Prediction through Deep Generative Model
title_full_unstemmed Link Prediction through Deep Generative Model
title_sort link prediction through deep generative model
publisher Elsevier
series iScience
issn 2589-0042
publishDate 2020-10-01
description Summary: Inferring missing links based on the currently observed network is known as link prediction, which has tremendous real-world applications in biomedicine, e-commerce, social media, and criminal intelligence. Numerous methods have been proposed to solve the link prediction problem. Yet, many of these methods are designed for undirected networks only and based on domain-specific heuristics. Here we developed a new link prediction method based on deep generative models, which does not rely on any domain-specific heuristic and works for general undirected or directed complex networks. Our key idea is to represent the adjacency matrix of a network as an image and then learn hierarchical feature representations of the image by training a deep generative model. Those features correspond to structural patterns in the network at different scales, from small subgraphs to mesoscopic communities. When applied to various real-world networks from different domains, our method shows overall superior performance against existing methods.
topic Complex Systems
Network Modeling
Network Topology
url http://www.sciencedirect.com/science/article/pii/S258900422030818X
work_keys_str_mv AT xuwenwang linkpredictionthroughdeepgenerativemodel
AT yizechen linkpredictionthroughdeepgenerativemodel
AT yangyuliu linkpredictionthroughdeepgenerativemodel
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