Biological and statistical interpretation of size-at-age, mixed-effects models of growth

The differences in life-history traits and processes between organisms living in the same or different populations contribute to their ecological and evolutionary dynamics. We developed mixed-effect model formulations of the popular size-at-age von Bertalanffy and Gompertz growth functions to estima...

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Main Authors: Simone Vincenzi, Dusan Jesensek, Alain J. Crivelli
Format: Article
Language:English
Published: The Royal Society 2020-04-01
Series:Royal Society Open Science
Subjects:
Online Access:https://royalsocietypublishing.org/doi/pdf/10.1098/rsos.192146
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spelling doaj-5355276bd1ac444c9ceb54a5ce09eb4f2020-11-25T03:44:04ZengThe Royal SocietyRoyal Society Open Science2054-57032020-04-017410.1098/rsos.192146192146Biological and statistical interpretation of size-at-age, mixed-effects models of growthSimone VincenziDusan JesensekAlain J. CrivelliThe differences in life-history traits and processes between organisms living in the same or different populations contribute to their ecological and evolutionary dynamics. We developed mixed-effect model formulations of the popular size-at-age von Bertalanffy and Gompertz growth functions to estimate individual and group variation in body growth, using as a model system four freshwater fish populations, where tagged individuals were sampled for more than 10 years. We used the software Template Model Builder to estimate the parameters of the mixed-effect growth models. Tests on data that were not used to estimate model parameters showed good predictions of individual growth trajectories using the mixed-effects models and starting from one single observation of body size early in life; the best models had R2 > 0.80 over more than 500 predictions. Estimates of asymptotic size from the Gompertz and von Bertalanffy models were not significantly correlated, but their predictions of size-at-age of individuals were strongly correlated (r > 0.99), which suggests that choosing between the best models of the two growth functions would have negligible effects on the predictions of size-at-age of individuals. Model results pointed to size ranks that are largely maintained throughout the lifetime of individuals in all populations.https://royalsocietypublishing.org/doi/pdf/10.1098/rsos.192146growthvon bertalanffygompertzmixed-effects models
collection DOAJ
language English
format Article
sources DOAJ
author Simone Vincenzi
Dusan Jesensek
Alain J. Crivelli
spellingShingle Simone Vincenzi
Dusan Jesensek
Alain J. Crivelli
Biological and statistical interpretation of size-at-age, mixed-effects models of growth
Royal Society Open Science
growth
von bertalanffy
gompertz
mixed-effects models
author_facet Simone Vincenzi
Dusan Jesensek
Alain J. Crivelli
author_sort Simone Vincenzi
title Biological and statistical interpretation of size-at-age, mixed-effects models of growth
title_short Biological and statistical interpretation of size-at-age, mixed-effects models of growth
title_full Biological and statistical interpretation of size-at-age, mixed-effects models of growth
title_fullStr Biological and statistical interpretation of size-at-age, mixed-effects models of growth
title_full_unstemmed Biological and statistical interpretation of size-at-age, mixed-effects models of growth
title_sort biological and statistical interpretation of size-at-age, mixed-effects models of growth
publisher The Royal Society
series Royal Society Open Science
issn 2054-5703
publishDate 2020-04-01
description The differences in life-history traits and processes between organisms living in the same or different populations contribute to their ecological and evolutionary dynamics. We developed mixed-effect model formulations of the popular size-at-age von Bertalanffy and Gompertz growth functions to estimate individual and group variation in body growth, using as a model system four freshwater fish populations, where tagged individuals were sampled for more than 10 years. We used the software Template Model Builder to estimate the parameters of the mixed-effect growth models. Tests on data that were not used to estimate model parameters showed good predictions of individual growth trajectories using the mixed-effects models and starting from one single observation of body size early in life; the best models had R2 > 0.80 over more than 500 predictions. Estimates of asymptotic size from the Gompertz and von Bertalanffy models were not significantly correlated, but their predictions of size-at-age of individuals were strongly correlated (r > 0.99), which suggests that choosing between the best models of the two growth functions would have negligible effects on the predictions of size-at-age of individuals. Model results pointed to size ranks that are largely maintained throughout the lifetime of individuals in all populations.
topic growth
von bertalanffy
gompertz
mixed-effects models
url https://royalsocietypublishing.org/doi/pdf/10.1098/rsos.192146
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AT dusanjesensek biologicalandstatisticalinterpretationofsizeatagemixedeffectsmodelsofgrowth
AT alainjcrivelli biologicalandstatisticalinterpretationofsizeatagemixedeffectsmodelsofgrowth
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