Biological and statistical interpretation of size-at-age, mixed-effects models of growth
The differences in life-history traits and processes between organisms living in the same or different populations contribute to their ecological and evolutionary dynamics. We developed mixed-effect model formulations of the popular size-at-age von Bertalanffy and Gompertz growth functions to estima...
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Online Access: | https://royalsocietypublishing.org/doi/pdf/10.1098/rsos.192146 |
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doaj-5355276bd1ac444c9ceb54a5ce09eb4f2020-11-25T03:44:04ZengThe Royal SocietyRoyal Society Open Science2054-57032020-04-017410.1098/rsos.192146192146Biological and statistical interpretation of size-at-age, mixed-effects models of growthSimone VincenziDusan JesensekAlain J. CrivelliThe differences in life-history traits and processes between organisms living in the same or different populations contribute to their ecological and evolutionary dynamics. We developed mixed-effect model formulations of the popular size-at-age von Bertalanffy and Gompertz growth functions to estimate individual and group variation in body growth, using as a model system four freshwater fish populations, where tagged individuals were sampled for more than 10 years. We used the software Template Model Builder to estimate the parameters of the mixed-effect growth models. Tests on data that were not used to estimate model parameters showed good predictions of individual growth trajectories using the mixed-effects models and starting from one single observation of body size early in life; the best models had R2 > 0.80 over more than 500 predictions. Estimates of asymptotic size from the Gompertz and von Bertalanffy models were not significantly correlated, but their predictions of size-at-age of individuals were strongly correlated (r > 0.99), which suggests that choosing between the best models of the two growth functions would have negligible effects on the predictions of size-at-age of individuals. Model results pointed to size ranks that are largely maintained throughout the lifetime of individuals in all populations.https://royalsocietypublishing.org/doi/pdf/10.1098/rsos.192146growthvon bertalanffygompertzmixed-effects models |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Simone Vincenzi Dusan Jesensek Alain J. Crivelli |
spellingShingle |
Simone Vincenzi Dusan Jesensek Alain J. Crivelli Biological and statistical interpretation of size-at-age, mixed-effects models of growth Royal Society Open Science growth von bertalanffy gompertz mixed-effects models |
author_facet |
Simone Vincenzi Dusan Jesensek Alain J. Crivelli |
author_sort |
Simone Vincenzi |
title |
Biological and statistical interpretation of size-at-age, mixed-effects models of growth |
title_short |
Biological and statistical interpretation of size-at-age, mixed-effects models of growth |
title_full |
Biological and statistical interpretation of size-at-age, mixed-effects models of growth |
title_fullStr |
Biological and statistical interpretation of size-at-age, mixed-effects models of growth |
title_full_unstemmed |
Biological and statistical interpretation of size-at-age, mixed-effects models of growth |
title_sort |
biological and statistical interpretation of size-at-age, mixed-effects models of growth |
publisher |
The Royal Society |
series |
Royal Society Open Science |
issn |
2054-5703 |
publishDate |
2020-04-01 |
description |
The differences in life-history traits and processes between organisms living in the same or different populations contribute to their ecological and evolutionary dynamics. We developed mixed-effect model formulations of the popular size-at-age von Bertalanffy and Gompertz growth functions to estimate individual and group variation in body growth, using as a model system four freshwater fish populations, where tagged individuals were sampled for more than 10 years. We used the software Template Model Builder to estimate the parameters of the mixed-effect growth models. Tests on data that were not used to estimate model parameters showed good predictions of individual growth trajectories using the mixed-effects models and starting from one single observation of body size early in life; the best models had R2 > 0.80 over more than 500 predictions. Estimates of asymptotic size from the Gompertz and von Bertalanffy models were not significantly correlated, but their predictions of size-at-age of individuals were strongly correlated (r > 0.99), which suggests that choosing between the best models of the two growth functions would have negligible effects on the predictions of size-at-age of individuals. Model results pointed to size ranks that are largely maintained throughout the lifetime of individuals in all populations. |
topic |
growth von bertalanffy gompertz mixed-effects models |
url |
https://royalsocietypublishing.org/doi/pdf/10.1098/rsos.192146 |
work_keys_str_mv |
AT simonevincenzi biologicalandstatisticalinterpretationofsizeatagemixedeffectsmodelsofgrowth AT dusanjesensek biologicalandstatisticalinterpretationofsizeatagemixedeffectsmodelsofgrowth AT alainjcrivelli biologicalandstatisticalinterpretationofsizeatagemixedeffectsmodelsofgrowth |
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