Description of Collinsella avium sp. nov., a new member of the Collinsella genus isolated from the ceacum of feral chicken

An obligately anaerobic, non-motile and Gram-positive rod bacterium, strain SW219 was isolated from ceacum of feral chickens. Based on 16S rRNA sequence analysis, the strain SW219 exhibited 97.88% similarity to Collinsella massiliensis strain GD3 strain, the closest valid species. The genome size of...

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Main Authors:	S. Wongkuna, S. Ghimire, S. Chankhamhaengdecha, T. Janvilisri, J. Scaria
Format:	Article
Language:	English
Published:	Elsevier 2021-07-01
Series:	New Microbes and New Infections
Subjects:	Chicken Collinsella gut health microbiome new species taxonogenomics
Online Access:	http://www.sciencedirect.com/science/article/pii/S2052297521000664

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spelling	doaj-52f7f5c2fb7f41f18764fac3859df7fa2021-07-31T04:38:58ZengElsevierNew Microbes and New Infections2052-29752021-07-0142100902Description of Collinsella avium sp. nov., a new member of the Collinsella genus isolated from the ceacum of feral chickenS. Wongkuna0S. Ghimire1S. Chankhamhaengdecha2T. Janvilisri3J. Scaria4Department of Veterinary and Biomedical Sciences, South Dakota State University, Brookings, SD, USA; South Dakota Center for Biologics Research and Commercialization, SD, USA; Department of Biochemistry, Faculty of Science, Mahidol University, Bangkok, ThailandDepartment of Veterinary and Biomedical Sciences, South Dakota State University, Brookings, SD, USA; South Dakota Center for Biologics Research and Commercialization, SD, USADepartment of Biology, Faculty of Science, Mahidol University, Bangkok, ThailandDepartment of Biochemistry, Faculty of Science, Mahidol University, Bangkok, ThailandDepartment of Veterinary and Biomedical Sciences, South Dakota State University, Brookings, SD, USA; South Dakota Center for Biologics Research and Commercialization, SD, USA; Corresponding author: J. Scaria, Department of Veterinary and Biomedical Sciences, South Dakota State University, Brookings, SD, USAAn obligately anaerobic, non-motile and Gram-positive rod bacterium, strain SW219 was isolated from ceacum of feral chickens. Based on 16S rRNA sequence analysis, the strain SW219 exhibited 97.88% similarity to Collinsella massiliensis strain GD3 strain, the closest valid species. The genome size of SW219 was 2.58 Mbp with 64.5 mol% of G+C content. The phenotypic and genotypic analysis suggested that the strain SW219 is a new species belonging to the family Coriobacteriaceae within the Actinobacteria phylum, which the name Collinsella avium sp. nov. is proposed. The type strain of Collinsella avium is SW219 (= DSM 109235T and = CCOS 1884T).http://www.sciencedirect.com/science/article/pii/S2052297521000664ChickenCollinsellagut healthmicrobiomenew speciestaxonogenomics
collection	DOAJ
language	English
format	Article
sources	DOAJ
author	S. Wongkuna S. Ghimire S. Chankhamhaengdecha T. Janvilisri J. Scaria
spellingShingle	S. Wongkuna S. Ghimire S. Chankhamhaengdecha T. Janvilisri J. Scaria Description of Collinsella avium sp. nov., a new member of the Collinsella genus isolated from the ceacum of feral chicken New Microbes and New Infections Chicken Collinsella gut health microbiome new species taxonogenomics
author_facet	S. Wongkuna S. Ghimire S. Chankhamhaengdecha T. Janvilisri J. Scaria
author_sort	S. Wongkuna
title	Description of Collinsella avium sp. nov., a new member of the Collinsella genus isolated from the ceacum of feral chicken
title_short	Description of Collinsella avium sp. nov., a new member of the Collinsella genus isolated from the ceacum of feral chicken
title_full	Description of Collinsella avium sp. nov., a new member of the Collinsella genus isolated from the ceacum of feral chicken
title_fullStr	Description of Collinsella avium sp. nov., a new member of the Collinsella genus isolated from the ceacum of feral chicken
title_full_unstemmed	Description of Collinsella avium sp. nov., a new member of the Collinsella genus isolated from the ceacum of feral chicken
title_sort	description of collinsella avium sp. nov., a new member of the collinsella genus isolated from the ceacum of feral chicken
publisher	Elsevier
series	New Microbes and New Infections
issn	2052-2975
publishDate	2021-07-01
description	An obligately anaerobic, non-motile and Gram-positive rod bacterium, strain SW219 was isolated from ceacum of feral chickens. Based on 16S rRNA sequence analysis, the strain SW219 exhibited 97.88% similarity to Collinsella massiliensis strain GD3 strain, the closest valid species. The genome size of SW219 was 2.58 Mbp with 64.5 mol% of G+C content. The phenotypic and genotypic analysis suggested that the strain SW219 is a new species belonging to the family Coriobacteriaceae within the Actinobacteria phylum, which the name Collinsella avium sp. nov. is proposed. The type strain of Collinsella avium is SW219 (= DSM 109235T and = CCOS 1884T).
topic	Chicken Collinsella gut health microbiome new species taxonogenomics
url	http://www.sciencedirect.com/science/article/pii/S2052297521000664
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Description of Collinsella avium sp. nov., a new member of the Collinsella genus isolated from the ceacum of feral chicken

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