High-Resolution Microscopy to Learn the Nuclear Organization of the Living Yeast Cells

The spatial organization of the nucleus is a key determinant in all genome activities. However, the accurate measurement of the nuclear organization is still technically challenging. Here, the technology NucQuant we created previously was utilized to detect the variation of the nuclear organization,...

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Main Authors: Renjie Wang, Aiwen Huang, Yan Wang, Pengxin Mei, He Zhu, Qianqian Chen, Sankui Xu
Format: Article
Language:English
Published: Hindawi Limited 2021-01-01
Series:Stem Cells International
Online Access:http://dx.doi.org/10.1155/2021/9951114
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spelling doaj-523aab99825a4c2eb7bcc67c9f5e5faa2021-09-13T01:23:24ZengHindawi LimitedStem Cells International1687-96782021-01-01202110.1155/2021/9951114High-Resolution Microscopy to Learn the Nuclear Organization of the Living Yeast CellsRenjie Wang0Aiwen Huang1Yan Wang2Pengxin Mei3He Zhu4Qianqian Chen5Sankui Xu6College of Materials Science & EngineeringCollege of Materials Science & EngineeringCollege of Materials Science & EngineeringCollege of Materials Science & EngineeringCollege of Materials Science & EngineeringCollege of Materials Science & EngineeringCollege of Materials Science & EngineeringThe spatial organization of the nucleus is a key determinant in all genome activities. However, the accurate measurement of the nuclear organization is still technically challenging. Here, the technology NucQuant we created previously was utilized to detect the variation of the nuclear organization, including the heterogeneity of the nuclear geometry, the change of the NPC distribution along different cell cycle stages during interphase, and the organization of the nucleolus. The results confirmed that not only the growth rate and the NPC distribution are influenced by the carbon source; the nuclear shape is also impacted by the carbon source. The nuclei lost their spherical geometry gradually when the cell was cultured from the most to a less favorable carbon source. We also discovered that the nucleolus prefers to locate at the nuclear periphery, which was called the “genes poor region,” especially when the cells entered quiescence. Furthermore, the distribution of the NPC along the different stages during the interphase was analyzed. We proposed that with the growth of the cell, the nucleus would grow from the surface of the NE flanking the nucleolus firstly.http://dx.doi.org/10.1155/2021/9951114
collection DOAJ
language English
format Article
sources DOAJ
author Renjie Wang
Aiwen Huang
Yan Wang
Pengxin Mei
He Zhu
Qianqian Chen
Sankui Xu
spellingShingle Renjie Wang
Aiwen Huang
Yan Wang
Pengxin Mei
He Zhu
Qianqian Chen
Sankui Xu
High-Resolution Microscopy to Learn the Nuclear Organization of the Living Yeast Cells
Stem Cells International
author_facet Renjie Wang
Aiwen Huang
Yan Wang
Pengxin Mei
He Zhu
Qianqian Chen
Sankui Xu
author_sort Renjie Wang
title High-Resolution Microscopy to Learn the Nuclear Organization of the Living Yeast Cells
title_short High-Resolution Microscopy to Learn the Nuclear Organization of the Living Yeast Cells
title_full High-Resolution Microscopy to Learn the Nuclear Organization of the Living Yeast Cells
title_fullStr High-Resolution Microscopy to Learn the Nuclear Organization of the Living Yeast Cells
title_full_unstemmed High-Resolution Microscopy to Learn the Nuclear Organization of the Living Yeast Cells
title_sort high-resolution microscopy to learn the nuclear organization of the living yeast cells
publisher Hindawi Limited
series Stem Cells International
issn 1687-9678
publishDate 2021-01-01
description The spatial organization of the nucleus is a key determinant in all genome activities. However, the accurate measurement of the nuclear organization is still technically challenging. Here, the technology NucQuant we created previously was utilized to detect the variation of the nuclear organization, including the heterogeneity of the nuclear geometry, the change of the NPC distribution along different cell cycle stages during interphase, and the organization of the nucleolus. The results confirmed that not only the growth rate and the NPC distribution are influenced by the carbon source; the nuclear shape is also impacted by the carbon source. The nuclei lost their spherical geometry gradually when the cell was cultured from the most to a less favorable carbon source. We also discovered that the nucleolus prefers to locate at the nuclear periphery, which was called the “genes poor region,” especially when the cells entered quiescence. Furthermore, the distribution of the NPC along the different stages during the interphase was analyzed. We proposed that with the growth of the cell, the nucleus would grow from the surface of the NE flanking the nucleolus firstly.
url http://dx.doi.org/10.1155/2021/9951114
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