Abundance estimation for line transect sampling: A comparison of distance sampling and spatial capture-recapture models.

Accurate and precise abundance estimation is vital for informed wildlife conservation and management decision-making. Line transect surveys are a common sampling approach for abundance estimation. Distance sampling is often used to estimate abundance from line transect survey data; however, search e...

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Main Authors: Nathan J Crum, Lisa C Neyman, Timothy A Gowan
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2021-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0252231
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spelling doaj-52247483a0d442679c0d50300dcf96b52021-06-13T04:30:17ZengPublic Library of Science (PLoS)PLoS ONE1932-62032021-01-01165e025223110.1371/journal.pone.0252231Abundance estimation for line transect sampling: A comparison of distance sampling and spatial capture-recapture models.Nathan J CrumLisa C NeymanTimothy A GowanAccurate and precise abundance estimation is vital for informed wildlife conservation and management decision-making. Line transect surveys are a common sampling approach for abundance estimation. Distance sampling is often used to estimate abundance from line transect survey data; however, search encounter spatial capture-recapture can also be used when individuals in the population of interest are identifiable. The search encounter spatial capture-recapture model has rarely been applied, and its performance has not been compared to that of distance sampling. We analyzed simulated datasets to compare the performance of distance sampling and spatial capture-recapture abundance estimators. Additionally, we estimated the abundance of North Atlantic right whales in the southeastern United States with two formulations of each model and compared the estimates. Spatial capture-recapture abundance estimates had lower root mean squared error than distance sampling estimates. Spatial capture-recapture 95% credible intervals for abundance had nominal coverage, i.e., contained the simulating value for abundance in 95% of simulations, whereas distance sampling credible intervals had below nominal coverage. Moreover, North Atlantic right whale abundance estimates from distance sampling models were more sensitive to model specification compared to spatial capture-recapture estimates. When estimating abundance from line transect data, researchers should consider using search encounter spatial capture-recapture when individuals in the population of interest are identifiable, when line transects are surveyed over multiple occasions, when there is imperfect detection of individuals located on the line transect, and when it is safe to assume the population of interest is closed demographically. When line transects are surveyed over multiple occasions, researchers should be aware that individual space use may induce spatial autocorrelation in counts across transects. This is not accounted for in common distance sampling estimators and leads to overly precise abundance estimates.https://doi.org/10.1371/journal.pone.0252231
collection DOAJ
language English
format Article
sources DOAJ
author Nathan J Crum
Lisa C Neyman
Timothy A Gowan
spellingShingle Nathan J Crum
Lisa C Neyman
Timothy A Gowan
Abundance estimation for line transect sampling: A comparison of distance sampling and spatial capture-recapture models.
PLoS ONE
author_facet Nathan J Crum
Lisa C Neyman
Timothy A Gowan
author_sort Nathan J Crum
title Abundance estimation for line transect sampling: A comparison of distance sampling and spatial capture-recapture models.
title_short Abundance estimation for line transect sampling: A comparison of distance sampling and spatial capture-recapture models.
title_full Abundance estimation for line transect sampling: A comparison of distance sampling and spatial capture-recapture models.
title_fullStr Abundance estimation for line transect sampling: A comparison of distance sampling and spatial capture-recapture models.
title_full_unstemmed Abundance estimation for line transect sampling: A comparison of distance sampling and spatial capture-recapture models.
title_sort abundance estimation for line transect sampling: a comparison of distance sampling and spatial capture-recapture models.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2021-01-01
description Accurate and precise abundance estimation is vital for informed wildlife conservation and management decision-making. Line transect surveys are a common sampling approach for abundance estimation. Distance sampling is often used to estimate abundance from line transect survey data; however, search encounter spatial capture-recapture can also be used when individuals in the population of interest are identifiable. The search encounter spatial capture-recapture model has rarely been applied, and its performance has not been compared to that of distance sampling. We analyzed simulated datasets to compare the performance of distance sampling and spatial capture-recapture abundance estimators. Additionally, we estimated the abundance of North Atlantic right whales in the southeastern United States with two formulations of each model and compared the estimates. Spatial capture-recapture abundance estimates had lower root mean squared error than distance sampling estimates. Spatial capture-recapture 95% credible intervals for abundance had nominal coverage, i.e., contained the simulating value for abundance in 95% of simulations, whereas distance sampling credible intervals had below nominal coverage. Moreover, North Atlantic right whale abundance estimates from distance sampling models were more sensitive to model specification compared to spatial capture-recapture estimates. When estimating abundance from line transect data, researchers should consider using search encounter spatial capture-recapture when individuals in the population of interest are identifiable, when line transects are surveyed over multiple occasions, when there is imperfect detection of individuals located on the line transect, and when it is safe to assume the population of interest is closed demographically. When line transects are surveyed over multiple occasions, researchers should be aware that individual space use may induce spatial autocorrelation in counts across transects. This is not accounted for in common distance sampling estimators and leads to overly precise abundance estimates.
url https://doi.org/10.1371/journal.pone.0252231
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