Draft genome assembly and annotation of the masked birch caterpillar, Drepana arcuata (Lepidoptera: Drepanoidea)

The masked birch caterpillar, Drepana arcuata Walker (Lepidoptera: Drepanidae), and other Drepanoidea (Lepidoptera) species are excellent organisms for investigating the function and evolution of vibratory communication and sociality in caterpillars. We present a de novo assembled draft genome and f...

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Main Authors: Chanchal Yadav, Myron Smith, Dele Ogunremi, Jayne Yack
Format: Article
Language:English
Published: Elsevier 2020-12-01
Series:Data in Brief
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S235234092031413X
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spelling doaj-51c4f890669444dd88e87c5702b9c4ab2020-12-21T04:44:52ZengElsevierData in Brief2352-34092020-12-0133106531Draft genome assembly and annotation of the masked birch caterpillar, Drepana arcuata (Lepidoptera: Drepanoidea)Chanchal Yadav0Myron Smith1Dele Ogunremi2Jayne Yack3Department of Biology, Carleton University, Ottawa, Ontario K1S 5B6, CanadaDepartment of Biology, Carleton University, Ottawa, Ontario K1S 5B6, CanadaCanadian Food Inspection Agency, Ottawa Laboratory Fallowfield, Ontario K2J 4S1, CanadaDepartment of Biology, Carleton University, Ottawa, Ontario K1S 5B6, Canada; Corresponding author.The masked birch caterpillar, Drepana arcuata Walker (Lepidoptera: Drepanidae), and other Drepanoidea (Lepidoptera) species are excellent organisms for investigating the function and evolution of vibratory communication and sociality in caterpillars. We present a de novo assembled draft genome and functional annotation for D. arcuata, using a combination of short and long sequencing reads generated by Illumina HiSeq X and Oxford Nanopore Technologies (ONT) MinION sequencing platforms, respectively. A total of 460,694,612 150bp paired-end Illumina and 395,890 ONT raw reads were assembled into 11,493 scaffolds spanning a genome size of 270.5Mb. The resulting D. arcuata genome has a GC content of 38.79%, repeat content of 8.26%, is 86.5% complete based on Benchmarking Universal Single-Copy Orthologs (BUSCO) assessment, and comprises 10,398 predicted protein-coding genes. These data represent the first genomic resources for the lepidopteran superfamily Drepanoidea. Although the order Lepidoptera comprises numerous ecologically and economically important species, assembled genomes and annotations are available for < 1% of the total species. These data can be further utilized for research on Lepidoptera genomics as well as on the function and evolution of vibratory communication and sociality in larval insects.http://www.sciencedirect.com/science/article/pii/S235234092031413XDrepana arcuataLepidoptera evolutionDraft genomeDrepanoideaSocialLarval vibroacoustics
collection DOAJ
language English
format Article
sources DOAJ
author Chanchal Yadav
Myron Smith
Dele Ogunremi
Jayne Yack
spellingShingle Chanchal Yadav
Myron Smith
Dele Ogunremi
Jayne Yack
Draft genome assembly and annotation of the masked birch caterpillar, Drepana arcuata (Lepidoptera: Drepanoidea)
Data in Brief
Drepana arcuata
Lepidoptera evolution
Draft genome
Drepanoidea
Social
Larval vibroacoustics
author_facet Chanchal Yadav
Myron Smith
Dele Ogunremi
Jayne Yack
author_sort Chanchal Yadav
title Draft genome assembly and annotation of the masked birch caterpillar, Drepana arcuata (Lepidoptera: Drepanoidea)
title_short Draft genome assembly and annotation of the masked birch caterpillar, Drepana arcuata (Lepidoptera: Drepanoidea)
title_full Draft genome assembly and annotation of the masked birch caterpillar, Drepana arcuata (Lepidoptera: Drepanoidea)
title_fullStr Draft genome assembly and annotation of the masked birch caterpillar, Drepana arcuata (Lepidoptera: Drepanoidea)
title_full_unstemmed Draft genome assembly and annotation of the masked birch caterpillar, Drepana arcuata (Lepidoptera: Drepanoidea)
title_sort draft genome assembly and annotation of the masked birch caterpillar, drepana arcuata (lepidoptera: drepanoidea)
publisher Elsevier
series Data in Brief
issn 2352-3409
publishDate 2020-12-01
description The masked birch caterpillar, Drepana arcuata Walker (Lepidoptera: Drepanidae), and other Drepanoidea (Lepidoptera) species are excellent organisms for investigating the function and evolution of vibratory communication and sociality in caterpillars. We present a de novo assembled draft genome and functional annotation for D. arcuata, using a combination of short and long sequencing reads generated by Illumina HiSeq X and Oxford Nanopore Technologies (ONT) MinION sequencing platforms, respectively. A total of 460,694,612 150bp paired-end Illumina and 395,890 ONT raw reads were assembled into 11,493 scaffolds spanning a genome size of 270.5Mb. The resulting D. arcuata genome has a GC content of 38.79%, repeat content of 8.26%, is 86.5% complete based on Benchmarking Universal Single-Copy Orthologs (BUSCO) assessment, and comprises 10,398 predicted protein-coding genes. These data represent the first genomic resources for the lepidopteran superfamily Drepanoidea. Although the order Lepidoptera comprises numerous ecologically and economically important species, assembled genomes and annotations are available for < 1% of the total species. These data can be further utilized for research on Lepidoptera genomics as well as on the function and evolution of vibratory communication and sociality in larval insects.
topic Drepana arcuata
Lepidoptera evolution
Draft genome
Drepanoidea
Social
Larval vibroacoustics
url http://www.sciencedirect.com/science/article/pii/S235234092031413X
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