Identification of Traditional She Medicine Shi-Liang Tea Species and Closely Related Species Using the ITS2 Barcode
Traditional She medicine is part of China’s cultural heritage and has become remarkably popular worldwide. The Shi-Liang tea is made from the processed leaves of Chimonanthus salicifolius S. Y. Hu and Chimonanthus zhejiangensis M. C. Liu. To ensure the safety and efficacy of Shi-Liang tea, we used D...
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doaj-5177d97e8250443ca55fe8cb2d42c9452020-11-24T21:06:41ZengMDPI AGApplied Sciences2076-34172017-02-017319510.3390/app7030195app7030195Identification of Traditional She Medicine Shi-Liang Tea Species and Closely Related Species Using the ITS2 BarcodeShuangjiao Ma0Qundan Lv1Hong Zhou2Jie Fang3Wenliang Cheng4Chengxi Jiang5Kejun Cheng6Hui Yao7Key Laboratory of Bioactive Substances and Resources Utilization of Chinese Herbal Medicine, Ministry of Education, Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100193, ChinaChemical Biology Center, Lishui Institute of Agricultural Sciences, Lishui 323000, Zhejiang, ChinaKey Laboratory of Bioactive Substances and Resources Utilization of Chinese Herbal Medicine, Ministry of Education, Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100193, ChinaChemical Biology Center, Lishui Institute of Agricultural Sciences, Lishui 323000, Zhejiang, ChinaChemical Biology Center, Lishui Institute of Agricultural Sciences, Lishui 323000, Zhejiang, ChinaSchool of Pharmaceutical Sciences, Wenzhou Medical University, Wenzhou 325035, Zhejiang, ChinaChemical Biology Center, Lishui Institute of Agricultural Sciences, Lishui 323000, Zhejiang, ChinaKey Laboratory of Bioactive Substances and Resources Utilization of Chinese Herbal Medicine, Ministry of Education, Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100193, ChinaTraditional She medicine is part of China’s cultural heritage and has become remarkably popular worldwide. The Shi-Liang tea is made from the processed leaves of Chimonanthus salicifolius S. Y. Hu and Chimonanthus zhejiangensis M. C. Liu. To ensure the safety and efficacy of Shi-Liang tea, we used DNA barcoding based on the internal transcribed spacer 2 (ITS2) of nuclear ribosomal DNA to distinguish the original plant sources of Shi-Liang tea from closely related species. All 71 ITS2 sequences were aligned by Clustal-W, and genetic distances were computed using MEGA 6.0 according to the Kimura 2-parameter model. The results indicated that the sequence lengths of ITS2 regions of the original plants of Shi-Liang tea and closely related species ranged from 256 bp to 260 bp. Interspecific genetic distances ranged from 0 to 0.078. The neighbor-joining (NJ) tree showed that the original plants of Shi-Liang tea species can be easily differentiated from closely related species. Distinct molecular differences were found between the secondary structures of ITS2 sequences from Shi-Liang tea and closely related species. The results in the present investigation suggested that the ITS2 could be an effective DNA marker to identify the original plants of Shi-Liang tea and their closely related species. These DNA barcodes can greatly benefit the supervision of the commercial circulation of She medicine.http://www.mdpi.com/2076-3417/7/3/195traditional She medicineShi-Liang teaChimonanthusITS2identification |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Shuangjiao Ma Qundan Lv Hong Zhou Jie Fang Wenliang Cheng Chengxi Jiang Kejun Cheng Hui Yao |
spellingShingle |
Shuangjiao Ma Qundan Lv Hong Zhou Jie Fang Wenliang Cheng Chengxi Jiang Kejun Cheng Hui Yao Identification of Traditional She Medicine Shi-Liang Tea Species and Closely Related Species Using the ITS2 Barcode Applied Sciences traditional She medicine Shi-Liang tea Chimonanthus ITS2 identification |
author_facet |
Shuangjiao Ma Qundan Lv Hong Zhou Jie Fang Wenliang Cheng Chengxi Jiang Kejun Cheng Hui Yao |
author_sort |
Shuangjiao Ma |
title |
Identification of Traditional She Medicine Shi-Liang Tea Species and Closely Related Species Using the ITS2 Barcode |
title_short |
Identification of Traditional She Medicine Shi-Liang Tea Species and Closely Related Species Using the ITS2 Barcode |
title_full |
Identification of Traditional She Medicine Shi-Liang Tea Species and Closely Related Species Using the ITS2 Barcode |
title_fullStr |
Identification of Traditional She Medicine Shi-Liang Tea Species and Closely Related Species Using the ITS2 Barcode |
title_full_unstemmed |
Identification of Traditional She Medicine Shi-Liang Tea Species and Closely Related Species Using the ITS2 Barcode |
title_sort |
identification of traditional she medicine shi-liang tea species and closely related species using the its2 barcode |
publisher |
MDPI AG |
series |
Applied Sciences |
issn |
2076-3417 |
publishDate |
2017-02-01 |
description |
Traditional She medicine is part of China’s cultural heritage and has become remarkably popular worldwide. The Shi-Liang tea is made from the processed leaves of Chimonanthus salicifolius S. Y. Hu and Chimonanthus zhejiangensis M. C. Liu. To ensure the safety and efficacy of Shi-Liang tea, we used DNA barcoding based on the internal transcribed spacer 2 (ITS2) of nuclear ribosomal DNA to distinguish the original plant sources of Shi-Liang tea from closely related species. All 71 ITS2 sequences were aligned by Clustal-W, and genetic distances were computed using MEGA 6.0 according to the Kimura 2-parameter model. The results indicated that the sequence lengths of ITS2 regions of the original plants of Shi-Liang tea and closely related species ranged from 256 bp to 260 bp. Interspecific genetic distances ranged from 0 to 0.078. The neighbor-joining (NJ) tree showed that the original plants of Shi-Liang tea species can be easily differentiated from closely related species. Distinct molecular differences were found between the secondary structures of ITS2 sequences from Shi-Liang tea and closely related species. The results in the present investigation suggested that the ITS2 could be an effective DNA marker to identify the original plants of Shi-Liang tea and their closely related species. These DNA barcodes can greatly benefit the supervision of the commercial circulation of She medicine. |
topic |
traditional She medicine Shi-Liang tea Chimonanthus ITS2 identification |
url |
http://www.mdpi.com/2076-3417/7/3/195 |
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