A multiplex real-time PCR quantitation of human herpesvirus-6, 7, 8 viruses: application in blood transfusions
Abstract Background In recent years, fluorescent quantitative polymerase chain reaction assays for detecting viral DNA are in widespread use throughout the world. However, considering the wide distribution of new herpesvirus among the population, we constructed a method to detect HHV-6, 7, and 8 sim...
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doaj-512a9a260fbd4db7b57d53deda0b50b52021-02-21T12:25:35ZengBMCVirology Journal1743-422X2021-02-011811810.1186/s12985-021-01510-6A multiplex real-time PCR quantitation of human herpesvirus-6, 7, 8 viruses: application in blood transfusionsYi Zheng0Youyun Zhao1Yefu Wang2Jun Rao3Department of Clinical Laboratory, Hubei Provincial Hospital of Traditional Chinese MedicineDepartment of Clinical Laboratory, Hubei Provincial Hospital of Traditional Chinese MedicineThe State Key Laboratory of Virology, College of Life Sciences, Wuhan UniversityDepartment of Clinical Laboratory, Hubei Provincial Hospital of Traditional Chinese MedicineAbstract Background In recent years, fluorescent quantitative polymerase chain reaction assays for detecting viral DNA are in widespread use throughout the world. However, considering the wide distribution of new herpesvirus among the population, we constructed a method to detect HHV-6, 7, and 8 simultaneously. Methods The blood samples of 74 blood donors and 45 pityriasis rosea patients were collected. The recombinant plasmids containing U67, U36, and orf65 were constructed to optimize the PCR reaction system. The forward and reverse primers and probe sequences of HHV-6 were as follows: TAAATATCGATGCCGCTCTG, ACGTTCTAGCCATCTTCTTTG, CGCAAACGACAAAGCCA. The forward and reverse primers and probe sequences of HHV-7 were as follows: TTAGACATCTTACACGACAGC, CAGCTTTTCGAACTTGTCAC, TTCATCGGGTACGTCCA. The forward and reverse primers and probe sequences of HHV-8 were as follows: GCGACATATTTCCCTGATCC, CCAACTTTAAGGTGAGAGACC, CATGCGAGCCACCAG. Through the detection of housekeeping genes, DNA sequencing, and optimization of the PCR reaction system, the triple fluorescent quantitative PCR detection system was constructed. Blood samples of blood transfusion staff and pityriasis rosea patients were detected. Results The correlations of HHV-6, 7, and 8 between single and multiplex PCR are 0.980, 0.987, 0.965, respectively. In 74 blood donor samples, 16.2% of HHV-6 and 55% of HHV-7 were positive (viral load > 3 log10 copies/ml) according to multiplex real-time PCR. In 45 patients suspected of pityriasis rosea (PR) infection, 40% HHV-6, 73.3% positive cases are found. Conclusion With the safety of blood transfusion being a major concern of the public, this method will show good specificity and sensitivity in blood transfusion screening.https://doi.org/10.1186/s12985-021-01510-6Human herpesvirusPityriasis roseaBlood transfusionMultiplex real-time PCR |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Yi Zheng Youyun Zhao Yefu Wang Jun Rao |
spellingShingle |
Yi Zheng Youyun Zhao Yefu Wang Jun Rao A multiplex real-time PCR quantitation of human herpesvirus-6, 7, 8 viruses: application in blood transfusions Virology Journal Human herpesvirus Pityriasis rosea Blood transfusion Multiplex real-time PCR |
author_facet |
Yi Zheng Youyun Zhao Yefu Wang Jun Rao |
author_sort |
Yi Zheng |
title |
A multiplex real-time PCR quantitation of human herpesvirus-6, 7, 8 viruses: application in blood transfusions |
title_short |
A multiplex real-time PCR quantitation of human herpesvirus-6, 7, 8 viruses: application in blood transfusions |
title_full |
A multiplex real-time PCR quantitation of human herpesvirus-6, 7, 8 viruses: application in blood transfusions |
title_fullStr |
A multiplex real-time PCR quantitation of human herpesvirus-6, 7, 8 viruses: application in blood transfusions |
title_full_unstemmed |
A multiplex real-time PCR quantitation of human herpesvirus-6, 7, 8 viruses: application in blood transfusions |
title_sort |
multiplex real-time pcr quantitation of human herpesvirus-6, 7, 8 viruses: application in blood transfusions |
publisher |
BMC |
series |
Virology Journal |
issn |
1743-422X |
publishDate |
2021-02-01 |
description |
Abstract Background In recent years, fluorescent quantitative polymerase chain reaction assays for detecting viral DNA are in widespread use throughout the world. However, considering the wide distribution of new herpesvirus among the population, we constructed a method to detect HHV-6, 7, and 8 simultaneously. Methods The blood samples of 74 blood donors and 45 pityriasis rosea patients were collected. The recombinant plasmids containing U67, U36, and orf65 were constructed to optimize the PCR reaction system. The forward and reverse primers and probe sequences of HHV-6 were as follows: TAAATATCGATGCCGCTCTG, ACGTTCTAGCCATCTTCTTTG, CGCAAACGACAAAGCCA. The forward and reverse primers and probe sequences of HHV-7 were as follows: TTAGACATCTTACACGACAGC, CAGCTTTTCGAACTTGTCAC, TTCATCGGGTACGTCCA. The forward and reverse primers and probe sequences of HHV-8 were as follows: GCGACATATTTCCCTGATCC, CCAACTTTAAGGTGAGAGACC, CATGCGAGCCACCAG. Through the detection of housekeeping genes, DNA sequencing, and optimization of the PCR reaction system, the triple fluorescent quantitative PCR detection system was constructed. Blood samples of blood transfusion staff and pityriasis rosea patients were detected. Results The correlations of HHV-6, 7, and 8 between single and multiplex PCR are 0.980, 0.987, 0.965, respectively. In 74 blood donor samples, 16.2% of HHV-6 and 55% of HHV-7 were positive (viral load > 3 log10 copies/ml) according to multiplex real-time PCR. In 45 patients suspected of pityriasis rosea (PR) infection, 40% HHV-6, 73.3% positive cases are found. Conclusion With the safety of blood transfusion being a major concern of the public, this method will show good specificity and sensitivity in blood transfusion screening. |
topic |
Human herpesvirus Pityriasis rosea Blood transfusion Multiplex real-time PCR |
url |
https://doi.org/10.1186/s12985-021-01510-6 |
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