Advances in High-Speed Structured Illumination Microscopy

Super-resolution microscopy surpasses the diffraction limit to enable the observation of the fine details in sub-cellular structures and their dynamics in diverse biological processes within living cells. Structured illumination microscopy (SIM) uses a relatively low illumination light power compare...

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Main Authors: Tianyu Zhao, Zhaojun Wang, Tongsheng Chen, Ming Lei, Baoli Yao, Piero R. Bianco
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-05-01
Series:Frontiers in Physics
Subjects:
SIM
Online Access:https://www.frontiersin.org/articles/10.3389/fphy.2021.672555/full
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spelling doaj-509cbd8628ab442cbc38bc14d1af82f42021-05-28T07:39:35ZengFrontiers Media S.A.Frontiers in Physics2296-424X2021-05-01910.3389/fphy.2021.672555672555Advances in High-Speed Structured Illumination MicroscopyTianyu Zhao0Tianyu Zhao1Tianyu Zhao2Zhaojun Wang3Tongsheng Chen4Ming Lei5Ming Lei6Baoli Yao7Baoli Yao8Piero R. Bianco9MOE Key Laboratory for Non-equilibrium Synthesis and Modulation of Condensed Matter, School of Physics, Xi’an Jiaotong University, Xi’an, ChinaState Key Laboratory of Transient Optics and Photonics, Xi’an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi’an, ChinaCollege of Materials Science and Opto-Electronic Technology, University of Chinese Academy of Sciences, Beijing, ChinaMOE Key Laboratory for Non-equilibrium Synthesis and Modulation of Condensed Matter, School of Physics, Xi’an Jiaotong University, Xi’an, ChinaMOE Key Laboratory of Laser Life Science & Guangdong Provincial Key Laboratory of Laser Life Science, College of Biophotonics, South China Normal University, Guangzhou, ChinaMOE Key Laboratory for Non-equilibrium Synthesis and Modulation of Condensed Matter, School of Physics, Xi’an Jiaotong University, Xi’an, ChinaCollege of Materials Science and Opto-Electronic Technology, University of Chinese Academy of Sciences, Beijing, ChinaState Key Laboratory of Transient Optics and Photonics, Xi’an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi’an, ChinaCollege of Materials Science and Opto-Electronic Technology, University of Chinese Academy of Sciences, Beijing, ChinaDepartment of Pharmaceutical Sciences, College of Pharmacy, University of Nebraska Medical Center, Omaha, NE, United StatesSuper-resolution microscopy surpasses the diffraction limit to enable the observation of the fine details in sub-cellular structures and their dynamics in diverse biological processes within living cells. Structured illumination microscopy (SIM) uses a relatively low illumination light power compared with other super-resolution microscopies and has great potential to meet the demands of live-cell imaging. However, the imaging acquisition and reconstruction speeds limit its further applications. In this article, recent developments all targeted at improving the overall speed of SIM are reviewed. These comprise both hardware and software improvements, which include a reduction in the number of raw images, GPU acceleration, deep learning and the spatial domain reconstruction. We also discuss the application of these developments in live-cell imaging.https://www.frontiersin.org/articles/10.3389/fphy.2021.672555/fullfluorescence microscopysuper-resolutionSIMhardware acceleration of deep learningimage reconstructed algorithm
collection DOAJ
language English
format Article
sources DOAJ
author Tianyu Zhao
Tianyu Zhao
Tianyu Zhao
Zhaojun Wang
Tongsheng Chen
Ming Lei
Ming Lei
Baoli Yao
Baoli Yao
Piero R. Bianco
spellingShingle Tianyu Zhao
Tianyu Zhao
Tianyu Zhao
Zhaojun Wang
Tongsheng Chen
Ming Lei
Ming Lei
Baoli Yao
Baoli Yao
Piero R. Bianco
Advances in High-Speed Structured Illumination Microscopy
Frontiers in Physics
fluorescence microscopy
super-resolution
SIM
hardware acceleration of deep learning
image reconstructed algorithm
author_facet Tianyu Zhao
Tianyu Zhao
Tianyu Zhao
Zhaojun Wang
Tongsheng Chen
Ming Lei
Ming Lei
Baoli Yao
Baoli Yao
Piero R. Bianco
author_sort Tianyu Zhao
title Advances in High-Speed Structured Illumination Microscopy
title_short Advances in High-Speed Structured Illumination Microscopy
title_full Advances in High-Speed Structured Illumination Microscopy
title_fullStr Advances in High-Speed Structured Illumination Microscopy
title_full_unstemmed Advances in High-Speed Structured Illumination Microscopy
title_sort advances in high-speed structured illumination microscopy
publisher Frontiers Media S.A.
series Frontiers in Physics
issn 2296-424X
publishDate 2021-05-01
description Super-resolution microscopy surpasses the diffraction limit to enable the observation of the fine details in sub-cellular structures and their dynamics in diverse biological processes within living cells. Structured illumination microscopy (SIM) uses a relatively low illumination light power compared with other super-resolution microscopies and has great potential to meet the demands of live-cell imaging. However, the imaging acquisition and reconstruction speeds limit its further applications. In this article, recent developments all targeted at improving the overall speed of SIM are reviewed. These comprise both hardware and software improvements, which include a reduction in the number of raw images, GPU acceleration, deep learning and the spatial domain reconstruction. We also discuss the application of these developments in live-cell imaging.
topic fluorescence microscopy
super-resolution
SIM
hardware acceleration of deep learning
image reconstructed algorithm
url https://www.frontiersin.org/articles/10.3389/fphy.2021.672555/full
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