Myc-like transcriptional factors in wheat: structural and functional organization of the subfamily I members

Abstract Background Myc-like regulatory factors carrying the basic helix–loop–helix (bHLH) domain belong to a large superfamily of transcriptional factors (TFs) present in all eukaryotic kingdoms. In plants, the representatives of this superfamily regulate diverse biological processes including grow...

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Main Authors: Ksenia V. Strygina, Elena K. Khlestkina
Format: Article
Language:English
Published: BMC 2019-02-01
Series:BMC Plant Biology
Subjects:
Myc
Online Access:http://link.springer.com/article/10.1186/s12870-019-1639-8
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spelling doaj-4e01bf03d92e44eaa2c6e2a2949e1df82020-11-25T01:21:50ZengBMCBMC Plant Biology1471-22292019-02-0119S1596910.1186/s12870-019-1639-8Myc-like transcriptional factors in wheat: structural and functional organization of the subfamily I membersKsenia V. Strygina0Elena K. Khlestkina1Siberian Branch of the Russian Academy of Sciences, Institute of Cytology and GeneticsSiberian Branch of the Russian Academy of Sciences, Institute of Cytology and GeneticsAbstract Background Myc-like regulatory factors carrying the basic helix–loop–helix (bHLH) domain belong to a large superfamily of transcriptional factors (TFs) present in all eukaryotic kingdoms. In plants, the representatives of this superfamily regulate diverse biological processes including growth and development as well as response to various stresses. As members of the regulatory MBW complexes, they participate in biosynthesis of flavonoids. In wheat, only one member (TaMyc1) of the Myc-like TFs family has been studied, while structural and functional organization of further members remained uncharacterized. From two Myc-subfamilies described recently in the genomes of Triticeae tribe species, we investigated thoroughly the members of the subfamily I which includes the TaMyc1 gene. Results Comparison of the promoter regions of the Myc subfamily I members in wheat suggested their division into two groups (likely homoeologous sets): TaMyc-1 (TaMyc-A1/TaMyc1, TaMyc-B1, TaMyc-D1) and TaMyc-2 (TaMyc-A2 and TaMyc-D2). It was demonstrated that the TaMyc-D1 copy has lost its functionality due to the frame shift mutation. The study of functional features of the other four copies suggested some of them to be involved in the biosynthesis of anthocyanins. In particular, TaMyc-B1 is assumed to be a co-regulator of the gene TaC1-A1 (encoding R2R3-Myb factor) in the MBW regulatory complex activating anthocyanin synthesis in wheat coleoptile. The mRNA levels of the TaMyc-A1, TaMyc-B1, TaMyc-A2 and TaMyc-D2 genes increased significantly in wheat seedlings exposed to osmotic stress. Salinity stress induced expression of TaMyc-B1 and TaMyc-A2, while TaMyc-A1 was repressed. Conclusions The features of the structural and functional organization of the members of subfamily I of Myc-like TFs in wheat were determined. Myc-like co-regulator (TaMyc-B1) of anthocyanin synthesis in wheat coleoptile was described for the first time. The Myc-encoding genes presumably involved in response to drought and salinity were determined in wheat. The results obtained are important for further manipulations with Myc genes, aimed on increasing wheat adaptability.http://link.springer.com/article/10.1186/s12870-019-1639-8Anthocyanin biosynthesisbHLHFlavonoid biosynthesisGene duplicationMycOsmotic stress
collection DOAJ
language English
format Article
sources DOAJ
author Ksenia V. Strygina
Elena K. Khlestkina
spellingShingle Ksenia V. Strygina
Elena K. Khlestkina
Myc-like transcriptional factors in wheat: structural and functional organization of the subfamily I members
BMC Plant Biology
Anthocyanin biosynthesis
bHLH
Flavonoid biosynthesis
Gene duplication
Myc
Osmotic stress
author_facet Ksenia V. Strygina
Elena K. Khlestkina
author_sort Ksenia V. Strygina
title Myc-like transcriptional factors in wheat: structural and functional organization of the subfamily I members
title_short Myc-like transcriptional factors in wheat: structural and functional organization of the subfamily I members
title_full Myc-like transcriptional factors in wheat: structural and functional organization of the subfamily I members
title_fullStr Myc-like transcriptional factors in wheat: structural and functional organization of the subfamily I members
title_full_unstemmed Myc-like transcriptional factors in wheat: structural and functional organization of the subfamily I members
title_sort myc-like transcriptional factors in wheat: structural and functional organization of the subfamily i members
publisher BMC
series BMC Plant Biology
issn 1471-2229
publishDate 2019-02-01
description Abstract Background Myc-like regulatory factors carrying the basic helix–loop–helix (bHLH) domain belong to a large superfamily of transcriptional factors (TFs) present in all eukaryotic kingdoms. In plants, the representatives of this superfamily regulate diverse biological processes including growth and development as well as response to various stresses. As members of the regulatory MBW complexes, they participate in biosynthesis of flavonoids. In wheat, only one member (TaMyc1) of the Myc-like TFs family has been studied, while structural and functional organization of further members remained uncharacterized. From two Myc-subfamilies described recently in the genomes of Triticeae tribe species, we investigated thoroughly the members of the subfamily I which includes the TaMyc1 gene. Results Comparison of the promoter regions of the Myc subfamily I members in wheat suggested their division into two groups (likely homoeologous sets): TaMyc-1 (TaMyc-A1/TaMyc1, TaMyc-B1, TaMyc-D1) and TaMyc-2 (TaMyc-A2 and TaMyc-D2). It was demonstrated that the TaMyc-D1 copy has lost its functionality due to the frame shift mutation. The study of functional features of the other four copies suggested some of them to be involved in the biosynthesis of anthocyanins. In particular, TaMyc-B1 is assumed to be a co-regulator of the gene TaC1-A1 (encoding R2R3-Myb factor) in the MBW regulatory complex activating anthocyanin synthesis in wheat coleoptile. The mRNA levels of the TaMyc-A1, TaMyc-B1, TaMyc-A2 and TaMyc-D2 genes increased significantly in wheat seedlings exposed to osmotic stress. Salinity stress induced expression of TaMyc-B1 and TaMyc-A2, while TaMyc-A1 was repressed. Conclusions The features of the structural and functional organization of the members of subfamily I of Myc-like TFs in wheat were determined. Myc-like co-regulator (TaMyc-B1) of anthocyanin synthesis in wheat coleoptile was described for the first time. The Myc-encoding genes presumably involved in response to drought and salinity were determined in wheat. The results obtained are important for further manipulations with Myc genes, aimed on increasing wheat adaptability.
topic Anthocyanin biosynthesis
bHLH
Flavonoid biosynthesis
Gene duplication
Myc
Osmotic stress
url http://link.springer.com/article/10.1186/s12870-019-1639-8
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