SplicedFamAlign: CDS-to-gene spliced alignment and identification of transcript orthology groups

SplicedFamAlign: CDS-to-gene spliced alignment and identification of transcript orthology groups

Abstract Background The inference of splicing orthology relationships between gene transcripts is a basic step for the prediction of transcripts and the annotation of gene structures in genomes. The splicing structure of a sequence refers to the exon extremity information in a CDS or the exon-intron...

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Bibliographic Details
Main Authors: Safa Jammali, Jean-David Aguilar, Esaie Kuitche, Aïda Ouangraoua
Format: Article
Language:English
Published: BMC 2019-03-01
Series:BMC Bioinformatics
Subjects:
Spliced alignment
Transcript orthology groups
Splicing structure
Splicing orthology
Gene family
Online Access:http://link.springer.com/article/10.1186/s12859-019-2647-2

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http://link.springer.com/article/10.1186/s12859-019-2647-2

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