Comparison of sequencing data processing pipelines and application to underrepresented African human populations

Comparison of sequencing data processing pipelines and application to underrepresented African human populations

Abstract Background Population genetic studies of humans make increasing use of high-throughput sequencing in order to capture diversity in an unbiased way. There is an abundance of sequencing technologies, bioinformatic tools and the available genomes are increasing in number. Studies have evaluate...

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Bibliographic Details
Main Authors: Gwenna Breton, Anna C. V. Johansson, Per Sjödin, Carina M. Schlebusch, Mattias Jakobsson
Format: Article
Language:English
Published: BMC 2021-10-01
Series:BMC Bioinformatics
Subjects:
Genome Analysis Toolkit (GATK)
High-throughput sequencing (HTS)
Next generation sequencing (NGS)
High coverage genomes
Underrepresented ancestry
Comparison of pipelines
Online Access:https://doi.org/10.1186/s12859-021-04407-x

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