Evolution of the Vertebrate Resistin Gene Family.
Resistin (encoded by Retn) was previously identified in rodents as a hormone associated with diabetes; however human resistin is instead linked to inflammation. Resistin is a member of a small gene family that includes the resistin-like peptides (encoded by Retnl genes) in mammals. Genomic searches...
Main Authors: | , , |
---|---|
Format: | Article |
Language: | English |
Published: |
Public Library of Science (PLoS)
2015-01-01
|
Series: | PLoS ONE |
Online Access: | http://europepmc.org/articles/PMC4467842?pdf=render |
id |
doaj-4d36651152ce4acd9a4d0d9989459ead |
---|---|
record_format |
Article |
spelling |
doaj-4d36651152ce4acd9a4d0d9989459ead2020-11-25T01:17:14ZengPublic Library of Science (PLoS)PLoS ONE1932-62032015-01-01106e013018810.1371/journal.pone.0130188Evolution of the Vertebrate Resistin Gene Family.Qingda HuHuanran TanDavid M IrwinResistin (encoded by Retn) was previously identified in rodents as a hormone associated with diabetes; however human resistin is instead linked to inflammation. Resistin is a member of a small gene family that includes the resistin-like peptides (encoded by Retnl genes) in mammals. Genomic searches of available genome sequences of diverse vertebrates and phylogenetic analyses were conducted to determine the size and origin of the resistin-like gene family. Genes encoding peptides similar to resistin were found in Mammalia, Sauria, Amphibia, and Actinistia (coelacanth, a lobe-finned fish), but not in Aves or fish from Actinopterygii, Chondrichthyes, or Agnatha. Retnl originated by duplication and transposition from Retn on the early mammalian lineage after divergence of the platypus, but before the placental and marsupial mammal divergence. The resistin-like gene family illustrates an instance where the locus of origin of duplicated genes can be identified, with Retn continuing to reside at this location. Mammalian species typically have a single copy Retn gene, but are much more variable in their numbers of Retnl genes, ranging from 0 to 9. Since Retn is located at the locus of origin, thus likely retained the ancestral expression pattern, largely maintained its copy number, and did not display accelerated evolution, we suggest that it is more likely to have maintained an ancestral function, while Retnl, which transposed to a new location, displays accelerated evolution, and shows greater variability in gene number, including gene loss, likely evolved new, but potentially lineage-specific, functions.http://europepmc.org/articles/PMC4467842?pdf=render |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Qingda Hu Huanran Tan David M Irwin |
spellingShingle |
Qingda Hu Huanran Tan David M Irwin Evolution of the Vertebrate Resistin Gene Family. PLoS ONE |
author_facet |
Qingda Hu Huanran Tan David M Irwin |
author_sort |
Qingda Hu |
title |
Evolution of the Vertebrate Resistin Gene Family. |
title_short |
Evolution of the Vertebrate Resistin Gene Family. |
title_full |
Evolution of the Vertebrate Resistin Gene Family. |
title_fullStr |
Evolution of the Vertebrate Resistin Gene Family. |
title_full_unstemmed |
Evolution of the Vertebrate Resistin Gene Family. |
title_sort |
evolution of the vertebrate resistin gene family. |
publisher |
Public Library of Science (PLoS) |
series |
PLoS ONE |
issn |
1932-6203 |
publishDate |
2015-01-01 |
description |
Resistin (encoded by Retn) was previously identified in rodents as a hormone associated with diabetes; however human resistin is instead linked to inflammation. Resistin is a member of a small gene family that includes the resistin-like peptides (encoded by Retnl genes) in mammals. Genomic searches of available genome sequences of diverse vertebrates and phylogenetic analyses were conducted to determine the size and origin of the resistin-like gene family. Genes encoding peptides similar to resistin were found in Mammalia, Sauria, Amphibia, and Actinistia (coelacanth, a lobe-finned fish), but not in Aves or fish from Actinopterygii, Chondrichthyes, or Agnatha. Retnl originated by duplication and transposition from Retn on the early mammalian lineage after divergence of the platypus, but before the placental and marsupial mammal divergence. The resistin-like gene family illustrates an instance where the locus of origin of duplicated genes can be identified, with Retn continuing to reside at this location. Mammalian species typically have a single copy Retn gene, but are much more variable in their numbers of Retnl genes, ranging from 0 to 9. Since Retn is located at the locus of origin, thus likely retained the ancestral expression pattern, largely maintained its copy number, and did not display accelerated evolution, we suggest that it is more likely to have maintained an ancestral function, while Retnl, which transposed to a new location, displays accelerated evolution, and shows greater variability in gene number, including gene loss, likely evolved new, but potentially lineage-specific, functions. |
url |
http://europepmc.org/articles/PMC4467842?pdf=render |
work_keys_str_mv |
AT qingdahu evolutionofthevertebrateresistingenefamily AT huanrantan evolutionofthevertebrateresistingenefamily AT davidmirwin evolutionofthevertebrateresistingenefamily |
_version_ |
1725147256874598400 |