Whole blood mRNA expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseases
Abstract Current diagnostic tests for tuberculosis (TB) are not able to predict reactivation disease progression from latent TB infection (LTBI). The main barrier to predicting reactivation disease is the lack of our understanding of host biomarkers associated with progression from latent infection...
Main Authors: | , , , , , , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
Nature Publishing Group
2020-12-01
|
Series: | Scientific Reports |
Online Access: | https://doi.org/10.1038/s41598-020-78793-2 |
id |
doaj-4ce4b49915e44cb6b99d8ed6de0bfebc |
---|---|
record_format |
Article |
spelling |
doaj-4ce4b49915e44cb6b99d8ed6de0bfebc2020-12-20T12:31:55ZengNature Publishing GroupScientific Reports2045-23222020-12-011011910.1038/s41598-020-78793-2Whole blood mRNA expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseasesJéssica D. Petrilli0Luana E. Araújo1Luciane Sussuchi da Silva2Ana Carolina Laus3Igor Müller4Rui Manuel Reis5Eduardo Martins Netto6Lee W. Riley7Sérgio Arruda8Adriano Queiroz9Advanced Laboratory of Public Health (LASP), Gonçalo Moniz Institute (IGM) / FiocruzAdvanced Laboratory of Public Health (LASP), Gonçalo Moniz Institute (IGM) / FiocruzMolecular Oncology Research Center, Barretos Cancer Hospital, R. Antenor Duarte VillelaMolecular Oncology Research Center, Barretos Cancer Hospital, R. Antenor Duarte VillelaAdvanced Laboratory of Public Health (LASP), Gonçalo Moniz Institute (IGM) / FiocruzMolecular Oncology Research Center, Barretos Cancer Hospital, R. Antenor Duarte VillelaFundação José SilveiraDivision of Infectious Diseases and Vaccinology, School of Public Health, University of CaliforniaAdvanced Laboratory of Public Health (LASP), Gonçalo Moniz Institute (IGM) / FiocruzAdvanced Laboratory of Public Health (LASP), Gonçalo Moniz Institute (IGM) / FiocruzAbstract Current diagnostic tests for tuberculosis (TB) are not able to predict reactivation disease progression from latent TB infection (LTBI). The main barrier to predicting reactivation disease is the lack of our understanding of host biomarkers associated with progression from latent infection to active disease. Here, we applied an immune-based gene expression profile by NanoString platform to identify whole blood markers that can distinguish active TB from other lung diseases (OPD), and that could be further evaluated as a reactivation TB predictor. Among 23 candidate genes that differentiated patients with active TB from those with OPD, nine genes (CD274, CEACAM1, CR1, FCGR1A/B, IFITM1, IRAK3, LILRA6, MAPK14, PDCD1LG2) demonstrated sensitivity and specificity of 100%. Seven genes (C1QB, C2, CCR2, CCRL2, LILRB4, MAPK14, MSR1) distinguished TB from LTBI with sensitivity and specificity between 82 and 100%. This study identified single gene candidates that distinguished TB from OPD and LTBI with high sensitivity and specificity (both > 82%), which may be further evaluated as diagnostic for disease and as predictive markers for reactivation TB.https://doi.org/10.1038/s41598-020-78793-2 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Jéssica D. Petrilli Luana E. Araújo Luciane Sussuchi da Silva Ana Carolina Laus Igor Müller Rui Manuel Reis Eduardo Martins Netto Lee W. Riley Sérgio Arruda Adriano Queiroz |
spellingShingle |
Jéssica D. Petrilli Luana E. Araújo Luciane Sussuchi da Silva Ana Carolina Laus Igor Müller Rui Manuel Reis Eduardo Martins Netto Lee W. Riley Sérgio Arruda Adriano Queiroz Whole blood mRNA expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseases Scientific Reports |
author_facet |
Jéssica D. Petrilli Luana E. Araújo Luciane Sussuchi da Silva Ana Carolina Laus Igor Müller Rui Manuel Reis Eduardo Martins Netto Lee W. Riley Sérgio Arruda Adriano Queiroz |
author_sort |
Jéssica D. Petrilli |
title |
Whole blood mRNA expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseases |
title_short |
Whole blood mRNA expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseases |
title_full |
Whole blood mRNA expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseases |
title_fullStr |
Whole blood mRNA expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseases |
title_full_unstemmed |
Whole blood mRNA expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseases |
title_sort |
whole blood mrna expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseases |
publisher |
Nature Publishing Group |
series |
Scientific Reports |
issn |
2045-2322 |
publishDate |
2020-12-01 |
description |
Abstract Current diagnostic tests for tuberculosis (TB) are not able to predict reactivation disease progression from latent TB infection (LTBI). The main barrier to predicting reactivation disease is the lack of our understanding of host biomarkers associated with progression from latent infection to active disease. Here, we applied an immune-based gene expression profile by NanoString platform to identify whole blood markers that can distinguish active TB from other lung diseases (OPD), and that could be further evaluated as a reactivation TB predictor. Among 23 candidate genes that differentiated patients with active TB from those with OPD, nine genes (CD274, CEACAM1, CR1, FCGR1A/B, IFITM1, IRAK3, LILRA6, MAPK14, PDCD1LG2) demonstrated sensitivity and specificity of 100%. Seven genes (C1QB, C2, CCR2, CCRL2, LILRB4, MAPK14, MSR1) distinguished TB from LTBI with sensitivity and specificity between 82 and 100%. This study identified single gene candidates that distinguished TB from OPD and LTBI with high sensitivity and specificity (both > 82%), which may be further evaluated as diagnostic for disease and as predictive markers for reactivation TB. |
url |
https://doi.org/10.1038/s41598-020-78793-2 |
work_keys_str_mv |
AT jessicadpetrilli wholebloodmrnaexpressionbasedtargetstodiscriminateactivetuberculosisfromlatentinfectionandotherpulmonarydiseases AT luanaearaujo wholebloodmrnaexpressionbasedtargetstodiscriminateactivetuberculosisfromlatentinfectionandotherpulmonarydiseases AT lucianesussuchidasilva wholebloodmrnaexpressionbasedtargetstodiscriminateactivetuberculosisfromlatentinfectionandotherpulmonarydiseases AT anacarolinalaus wholebloodmrnaexpressionbasedtargetstodiscriminateactivetuberculosisfromlatentinfectionandotherpulmonarydiseases AT igormuller wholebloodmrnaexpressionbasedtargetstodiscriminateactivetuberculosisfromlatentinfectionandotherpulmonarydiseases AT ruimanuelreis wholebloodmrnaexpressionbasedtargetstodiscriminateactivetuberculosisfromlatentinfectionandotherpulmonarydiseases AT eduardomartinsnetto wholebloodmrnaexpressionbasedtargetstodiscriminateactivetuberculosisfromlatentinfectionandotherpulmonarydiseases AT leewriley wholebloodmrnaexpressionbasedtargetstodiscriminateactivetuberculosisfromlatentinfectionandotherpulmonarydiseases AT sergioarruda wholebloodmrnaexpressionbasedtargetstodiscriminateactivetuberculosisfromlatentinfectionandotherpulmonarydiseases AT adrianoqueiroz wholebloodmrnaexpressionbasedtargetstodiscriminateactivetuberculosisfromlatentinfectionandotherpulmonarydiseases |
_version_ |
1724376477204480000 |