Whole blood mRNA expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseases

Abstract Current diagnostic tests for tuberculosis (TB) are not able to predict reactivation disease progression from latent TB infection (LTBI). The main barrier to predicting reactivation disease is the lack of our understanding of host biomarkers associated with progression from latent infection...

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Main Authors: Jéssica D. Petrilli, Luana E. Araújo, Luciane Sussuchi da Silva, Ana Carolina Laus, Igor Müller, Rui Manuel Reis, Eduardo Martins Netto, Lee W. Riley, Sérgio Arruda, Adriano Queiroz
Format: Article
Language:English
Published: Nature Publishing Group 2020-12-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-020-78793-2
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spelling doaj-4ce4b49915e44cb6b99d8ed6de0bfebc2020-12-20T12:31:55ZengNature Publishing GroupScientific Reports2045-23222020-12-011011910.1038/s41598-020-78793-2Whole blood mRNA expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseasesJéssica D. Petrilli0Luana E. Araújo1Luciane Sussuchi da Silva2Ana Carolina Laus3Igor Müller4Rui Manuel Reis5Eduardo Martins Netto6Lee W. Riley7Sérgio Arruda8Adriano Queiroz9Advanced Laboratory of Public Health (LASP), Gonçalo Moniz Institute (IGM) / FiocruzAdvanced Laboratory of Public Health (LASP), Gonçalo Moniz Institute (IGM) / FiocruzMolecular Oncology Research Center, Barretos Cancer Hospital, R. Antenor Duarte VillelaMolecular Oncology Research Center, Barretos Cancer Hospital, R. Antenor Duarte VillelaAdvanced Laboratory of Public Health (LASP), Gonçalo Moniz Institute (IGM) / FiocruzMolecular Oncology Research Center, Barretos Cancer Hospital, R. Antenor Duarte VillelaFundação José SilveiraDivision of Infectious Diseases and Vaccinology, School of Public Health, University of CaliforniaAdvanced Laboratory of Public Health (LASP), Gonçalo Moniz Institute (IGM) / FiocruzAdvanced Laboratory of Public Health (LASP), Gonçalo Moniz Institute (IGM) / FiocruzAbstract Current diagnostic tests for tuberculosis (TB) are not able to predict reactivation disease progression from latent TB infection (LTBI). The main barrier to predicting reactivation disease is the lack of our understanding of host biomarkers associated with progression from latent infection to active disease. Here, we applied an immune-based gene expression profile by NanoString platform to identify whole blood markers that can distinguish active TB from other lung diseases (OPD), and that could be further evaluated as a reactivation TB predictor. Among 23 candidate genes that differentiated patients with active TB from those with OPD, nine genes (CD274, CEACAM1, CR1, FCGR1A/B, IFITM1, IRAK3, LILRA6, MAPK14, PDCD1LG2) demonstrated sensitivity and specificity of 100%. Seven genes (C1QB, C2, CCR2, CCRL2, LILRB4, MAPK14, MSR1) distinguished TB from LTBI with sensitivity and specificity between 82 and 100%. This study identified single gene candidates that distinguished TB from OPD and LTBI with high sensitivity and specificity (both > 82%), which may be further evaluated as diagnostic for disease and as predictive markers for reactivation TB.https://doi.org/10.1038/s41598-020-78793-2
collection DOAJ
language English
format Article
sources DOAJ
author Jéssica D. Petrilli
Luana E. Araújo
Luciane Sussuchi da Silva
Ana Carolina Laus
Igor Müller
Rui Manuel Reis
Eduardo Martins Netto
Lee W. Riley
Sérgio Arruda
Adriano Queiroz
spellingShingle Jéssica D. Petrilli
Luana E. Araújo
Luciane Sussuchi da Silva
Ana Carolina Laus
Igor Müller
Rui Manuel Reis
Eduardo Martins Netto
Lee W. Riley
Sérgio Arruda
Adriano Queiroz
Whole blood mRNA expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseases
Scientific Reports
author_facet Jéssica D. Petrilli
Luana E. Araújo
Luciane Sussuchi da Silva
Ana Carolina Laus
Igor Müller
Rui Manuel Reis
Eduardo Martins Netto
Lee W. Riley
Sérgio Arruda
Adriano Queiroz
author_sort Jéssica D. Petrilli
title Whole blood mRNA expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseases
title_short Whole blood mRNA expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseases
title_full Whole blood mRNA expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseases
title_fullStr Whole blood mRNA expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseases
title_full_unstemmed Whole blood mRNA expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseases
title_sort whole blood mrna expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseases
publisher Nature Publishing Group
series Scientific Reports
issn 2045-2322
publishDate 2020-12-01
description Abstract Current diagnostic tests for tuberculosis (TB) are not able to predict reactivation disease progression from latent TB infection (LTBI). The main barrier to predicting reactivation disease is the lack of our understanding of host biomarkers associated with progression from latent infection to active disease. Here, we applied an immune-based gene expression profile by NanoString platform to identify whole blood markers that can distinguish active TB from other lung diseases (OPD), and that could be further evaluated as a reactivation TB predictor. Among 23 candidate genes that differentiated patients with active TB from those with OPD, nine genes (CD274, CEACAM1, CR1, FCGR1A/B, IFITM1, IRAK3, LILRA6, MAPK14, PDCD1LG2) demonstrated sensitivity and specificity of 100%. Seven genes (C1QB, C2, CCR2, CCRL2, LILRB4, MAPK14, MSR1) distinguished TB from LTBI with sensitivity and specificity between 82 and 100%. This study identified single gene candidates that distinguished TB from OPD and LTBI with high sensitivity and specificity (both > 82%), which may be further evaluated as diagnostic for disease and as predictive markers for reactivation TB.
url https://doi.org/10.1038/s41598-020-78793-2
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