Identification of anti-SF3B1 autoantibody as a diagnostic marker in patients with hepatocellular carcinoma

Abstract Background Tumor-associated (TA) autoantibodies, which are generated by the immune system upon the recognition of abnormal TA antigens, are promising biomarkers for the early detection of tumors. In order to detect autoantibody biomarkers effectively, antibody-specific epitopes in the diagn...

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Main Authors: Hai-Min Hwang, Chang-Kyu Heo, Hye Jung Lee, Sang-Seob Kwak, Won-Hee Lim, Jong-Shin Yoo, Dae-Yuel Yu, Kook Jin Lim, Jeong-Yoon Kim, Eun-Wie Cho
Format: Article
Language:English
Published: BMC 2018-06-01
Series:Journal of Translational Medicine
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Online Access:http://link.springer.com/article/10.1186/s12967-018-1546-z
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spelling doaj-48bb343635fd472d984c334a592a752a2020-11-25T01:33:30ZengBMCJournal of Translational Medicine1479-58762018-06-0116111610.1186/s12967-018-1546-zIdentification of anti-SF3B1 autoantibody as a diagnostic marker in patients with hepatocellular carcinomaHai-Min Hwang0Chang-Kyu Heo1Hye Jung Lee2Sang-Seob Kwak3Won-Hee Lim4Jong-Shin Yoo5Dae-Yuel Yu6Kook Jin Lim7Jeong-Yoon Kim8Eun-Wie Cho9Rare Disease Research Center, Korea Research Institute of Bioscience and BiotechnologyRare Disease Research Center, Korea Research Institute of Bioscience and BiotechnologyProteometech Inc.Rare Disease Research Center, Korea Research Institute of Bioscience and BiotechnologyRare Disease Research Center, Korea Research Institute of Bioscience and BiotechnologyBiomedical Omics Group, Korea Basic Science InstituteDisease Model Research Laboratory, Korea Research Institute of Bioscience and BiotechnologyProteometech Inc.Department of Microbiology and Molecular Biology, College of Bioscience and Biotechnology, Chungnam National UniversityRare Disease Research Center, Korea Research Institute of Bioscience and BiotechnologyAbstract Background Tumor-associated (TA) autoantibodies, which are generated by the immune system upon the recognition of abnormal TA antigens, are promising biomarkers for the early detection of tumors. In order to detect autoantibody biomarkers effectively, antibody-specific epitopes in the diagnostic test should maintain the specific conformations that are as close as possible to those presenting in the body. However, when using patients’ serum as a source of TA autoantibodies the characterization of the autoantibody-specific epitope is not easy due to the limited amount of patient-derived serum. Methods To overcome these limits, we constructed a B cell hybridoma pool derived from a hepatocellular carcinoma (HCC) model HBx-transgenic mouse and characterized autoantibodies derived from them as tumor biomarkers. Their target antigens were identified by mass spectrometry and the correlations with HCC were examined. With the assumption that TA autoantibodies generated in the tumor mouse model are induced in human cancer patients, the enzyme-linked immunosorbent assays (ELISA) based on the characteristics of mouse TA autoantibodies were developed for the detection of autoantibody biomarkers in human serum. To mimic natural antigenic structures, the specific epitopes against autoantibodies were screened from the phage display cyclic random heptapeptide library, and the streptavidin antigens fused with the specific epitopes were used as coating antigens. Results In this study, one of HCC-associated autoantibodies derived from HBx-transgenic mouse, XC24, was characterized. Its target antigen was identified as splicing factor 3b subunit 1 (SF3B1) and the high expression of SF3B1 was confirmed in HCC tissues. The specific peptide epitopes against XC24 were selected and, among them, XC24p11 cyclic peptide (-CDATPPRLC-) was used as an epitope of anti-SF3B1 autoantibody ELISA. With this epitope, we could effectively distinguish between serum samples from HCC patients (n = 102) and healthy subjects (n = 85) with 73.53% sensitivity and 91.76% specificity (AUC = 0.8731). Moreover, the simultaneous detection of anti-XC24p11 epitope autoantibody and AFP enhanced the efficiency of HCC diagnosis with 87.25% sensitivity and 90.59% specificity (AUC = 0.9081). Conclusions ELISA using XC24p11 peptide epitope that reacts against anti-SF3B1 autoantibody can be used as a novel test to enhance the diagnostic efficiency of HCC.http://link.springer.com/article/10.1186/s12967-018-1546-zAutoantibody biomarkerSF3B1Hepatocellular carcinomaCyclic peptide epitopeHuman serum ELISA
collection DOAJ
language English
format Article
sources DOAJ
author Hai-Min Hwang
Chang-Kyu Heo
Hye Jung Lee
Sang-Seob Kwak
Won-Hee Lim
Jong-Shin Yoo
Dae-Yuel Yu
Kook Jin Lim
Jeong-Yoon Kim
Eun-Wie Cho
spellingShingle Hai-Min Hwang
Chang-Kyu Heo
Hye Jung Lee
Sang-Seob Kwak
Won-Hee Lim
Jong-Shin Yoo
Dae-Yuel Yu
Kook Jin Lim
Jeong-Yoon Kim
Eun-Wie Cho
Identification of anti-SF3B1 autoantibody as a diagnostic marker in patients with hepatocellular carcinoma
Journal of Translational Medicine
Autoantibody biomarker
SF3B1
Hepatocellular carcinoma
Cyclic peptide epitope
Human serum ELISA
author_facet Hai-Min Hwang
Chang-Kyu Heo
Hye Jung Lee
Sang-Seob Kwak
Won-Hee Lim
Jong-Shin Yoo
Dae-Yuel Yu
Kook Jin Lim
Jeong-Yoon Kim
Eun-Wie Cho
author_sort Hai-Min Hwang
title Identification of anti-SF3B1 autoantibody as a diagnostic marker in patients with hepatocellular carcinoma
title_short Identification of anti-SF3B1 autoantibody as a diagnostic marker in patients with hepatocellular carcinoma
title_full Identification of anti-SF3B1 autoantibody as a diagnostic marker in patients with hepatocellular carcinoma
title_fullStr Identification of anti-SF3B1 autoantibody as a diagnostic marker in patients with hepatocellular carcinoma
title_full_unstemmed Identification of anti-SF3B1 autoantibody as a diagnostic marker in patients with hepatocellular carcinoma
title_sort identification of anti-sf3b1 autoantibody as a diagnostic marker in patients with hepatocellular carcinoma
publisher BMC
series Journal of Translational Medicine
issn 1479-5876
publishDate 2018-06-01
description Abstract Background Tumor-associated (TA) autoantibodies, which are generated by the immune system upon the recognition of abnormal TA antigens, are promising biomarkers for the early detection of tumors. In order to detect autoantibody biomarkers effectively, antibody-specific epitopes in the diagnostic test should maintain the specific conformations that are as close as possible to those presenting in the body. However, when using patients’ serum as a source of TA autoantibodies the characterization of the autoantibody-specific epitope is not easy due to the limited amount of patient-derived serum. Methods To overcome these limits, we constructed a B cell hybridoma pool derived from a hepatocellular carcinoma (HCC) model HBx-transgenic mouse and characterized autoantibodies derived from them as tumor biomarkers. Their target antigens were identified by mass spectrometry and the correlations with HCC were examined. With the assumption that TA autoantibodies generated in the tumor mouse model are induced in human cancer patients, the enzyme-linked immunosorbent assays (ELISA) based on the characteristics of mouse TA autoantibodies were developed for the detection of autoantibody biomarkers in human serum. To mimic natural antigenic structures, the specific epitopes against autoantibodies were screened from the phage display cyclic random heptapeptide library, and the streptavidin antigens fused with the specific epitopes were used as coating antigens. Results In this study, one of HCC-associated autoantibodies derived from HBx-transgenic mouse, XC24, was characterized. Its target antigen was identified as splicing factor 3b subunit 1 (SF3B1) and the high expression of SF3B1 was confirmed in HCC tissues. The specific peptide epitopes against XC24 were selected and, among them, XC24p11 cyclic peptide (-CDATPPRLC-) was used as an epitope of anti-SF3B1 autoantibody ELISA. With this epitope, we could effectively distinguish between serum samples from HCC patients (n = 102) and healthy subjects (n = 85) with 73.53% sensitivity and 91.76% specificity (AUC = 0.8731). Moreover, the simultaneous detection of anti-XC24p11 epitope autoantibody and AFP enhanced the efficiency of HCC diagnosis with 87.25% sensitivity and 90.59% specificity (AUC = 0.9081). Conclusions ELISA using XC24p11 peptide epitope that reacts against anti-SF3B1 autoantibody can be used as a novel test to enhance the diagnostic efficiency of HCC.
topic Autoantibody biomarker
SF3B1
Hepatocellular carcinoma
Cyclic peptide epitope
Human serum ELISA
url http://link.springer.com/article/10.1186/s12967-018-1546-z
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