Exploring the Mechanism of Flavonoids Through Systematic Bioinformatics Analysis
Flavonoids are the largest class of plant polyphenols, with common structure of diphenylpropanes, consisting of two aromatic rings linked through three carbons and are abundant in both daily diets and medicinal plants. Fueled by the recognition of consuming flavonoids to get better health, researche...
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doaj-487eed4c409a4494befeed2c618c46b32020-11-24T23:18:13ZengFrontiers Media S.A.Frontiers in Pharmacology1663-98122018-08-01910.3389/fphar.2018.00918361101Exploring the Mechanism of Flavonoids Through Systematic Bioinformatics AnalysisTianyi Qiu0Dingfeng Wu1LinLin Yang2Hao Ye3Hao Ye4Qiming Wang5Zhiwei Cao6Kailin Tang7Institute of Biomedical Sciences, Fudan University, Shanghai, ChinaSchool of Life Sciences and Technology, Tongji University, Shanghai, ChinaHebei Key Laboratory of Metabolic Diseases and Clinical Medicine Research Center, Hebei General Hospital, Hebei, ChinaSinotech Genomics Ltd., Shanghai, ChinaEast China University of Science and Technology, Shanghai, ChinaSchool of Life Sciences and Technology, Tongji University, Shanghai, ChinaSchool of Life Sciences and Technology, Tongji University, Shanghai, ChinaSchool of Life Sciences and Technology, Tongji University, Shanghai, ChinaFlavonoids are the largest class of plant polyphenols, with common structure of diphenylpropanes, consisting of two aromatic rings linked through three carbons and are abundant in both daily diets and medicinal plants. Fueled by the recognition of consuming flavonoids to get better health, researchers became interested in deciphering how flavonoids alter the functions of human body. Here, systematic studies were performed on 679 flavonoid compounds and 481 corresponding targets through bioinformatics analysis. Multiple human diseases related pathways including cancers, neuro-disease, diabetes, and infectious diseases were significantly regulated by flavonoids. Specific functions of each flavonoid subclass were further analyzed in both target and pathway level. Flavones and isoflavones were significantly enriched in multi-cancer related pathways, flavan-3-ols were found focusing on cellular processing and lymphocyte regulation, flavones preferred to act on cardiovascular related activities and isoflavones were closely related with cell multisystem disorders. Relationship between chemical constitution fragment and biological effects indicated that different side chain could significantly affect the biological functions of flavonoids subclasses. Results will highlight the common and preference functions of flavonoids and their subclasses, which concerning their pharmacological and biological properties.https://www.frontiersin.org/article/10.3389/fphar.2018.00918/fullflavonoidsmechanism of actionpathway analysisprotein–protein interaction networkstructure activity relationship |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Tianyi Qiu Dingfeng Wu LinLin Yang Hao Ye Hao Ye Qiming Wang Zhiwei Cao Kailin Tang |
spellingShingle |
Tianyi Qiu Dingfeng Wu LinLin Yang Hao Ye Hao Ye Qiming Wang Zhiwei Cao Kailin Tang Exploring the Mechanism of Flavonoids Through Systematic Bioinformatics Analysis Frontiers in Pharmacology flavonoids mechanism of action pathway analysis protein–protein interaction network structure activity relationship |
author_facet |
Tianyi Qiu Dingfeng Wu LinLin Yang Hao Ye Hao Ye Qiming Wang Zhiwei Cao Kailin Tang |
author_sort |
Tianyi Qiu |
title |
Exploring the Mechanism of Flavonoids Through Systematic Bioinformatics Analysis |
title_short |
Exploring the Mechanism of Flavonoids Through Systematic Bioinformatics Analysis |
title_full |
Exploring the Mechanism of Flavonoids Through Systematic Bioinformatics Analysis |
title_fullStr |
Exploring the Mechanism of Flavonoids Through Systematic Bioinformatics Analysis |
title_full_unstemmed |
Exploring the Mechanism of Flavonoids Through Systematic Bioinformatics Analysis |
title_sort |
exploring the mechanism of flavonoids through systematic bioinformatics analysis |
publisher |
Frontiers Media S.A. |
series |
Frontiers in Pharmacology |
issn |
1663-9812 |
publishDate |
2018-08-01 |
description |
Flavonoids are the largest class of plant polyphenols, with common structure of diphenylpropanes, consisting of two aromatic rings linked through three carbons and are abundant in both daily diets and medicinal plants. Fueled by the recognition of consuming flavonoids to get better health, researchers became interested in deciphering how flavonoids alter the functions of human body. Here, systematic studies were performed on 679 flavonoid compounds and 481 corresponding targets through bioinformatics analysis. Multiple human diseases related pathways including cancers, neuro-disease, diabetes, and infectious diseases were significantly regulated by flavonoids. Specific functions of each flavonoid subclass were further analyzed in both target and pathway level. Flavones and isoflavones were significantly enriched in multi-cancer related pathways, flavan-3-ols were found focusing on cellular processing and lymphocyte regulation, flavones preferred to act on cardiovascular related activities and isoflavones were closely related with cell multisystem disorders. Relationship between chemical constitution fragment and biological effects indicated that different side chain could significantly affect the biological functions of flavonoids subclasses. Results will highlight the common and preference functions of flavonoids and their subclasses, which concerning their pharmacological and biological properties. |
topic |
flavonoids mechanism of action pathway analysis protein–protein interaction network structure activity relationship |
url |
https://www.frontiersin.org/article/10.3389/fphar.2018.00918/full |
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