Evaluation of Six Algorithms to Monitor Wheat Leaf Nitrogen Concentration

The rapid and non-destructive monitoring of the canopy leaf nitrogen concentration (LNC) in crops is important for precise nitrogen (N) management. Nowadays, there is an urgent need to identify next-generation bio-physical variable retrieval algorithms that can be incorporated into an operational pr...

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Main Authors: Xia Yao, Yu Huang, Guiyan Shang, Chen Zhou, Tao Cheng, Yongchao Tian, Weixing Cao, Yan Zhu
Format: Article
Language:English
Published: MDPI AG 2015-11-01
Series:Remote Sensing
Subjects:
Online Access:http://www.mdpi.com/2072-4292/7/11/14939
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record_format Article
collection DOAJ
language English
format Article
sources DOAJ
author Xia Yao
Yu Huang
Guiyan Shang
Chen Zhou
Tao Cheng
Yongchao Tian
Weixing Cao
Yan Zhu
spellingShingle Xia Yao
Yu Huang
Guiyan Shang
Chen Zhou
Tao Cheng
Yongchao Tian
Weixing Cao
Yan Zhu
Evaluation of Six Algorithms to Monitor Wheat Leaf Nitrogen Concentration
Remote Sensing
six algorithms
comparative analysis
number of wavelengths
leaf nitrogen concentration
monitoring accuracy
winter wheat
author_facet Xia Yao
Yu Huang
Guiyan Shang
Chen Zhou
Tao Cheng
Yongchao Tian
Weixing Cao
Yan Zhu
author_sort Xia Yao
title Evaluation of Six Algorithms to Monitor Wheat Leaf Nitrogen Concentration
title_short Evaluation of Six Algorithms to Monitor Wheat Leaf Nitrogen Concentration
title_full Evaluation of Six Algorithms to Monitor Wheat Leaf Nitrogen Concentration
title_fullStr Evaluation of Six Algorithms to Monitor Wheat Leaf Nitrogen Concentration
title_full_unstemmed Evaluation of Six Algorithms to Monitor Wheat Leaf Nitrogen Concentration
title_sort evaluation of six algorithms to monitor wheat leaf nitrogen concentration
publisher MDPI AG
series Remote Sensing
issn 2072-4292
publishDate 2015-11-01
description The rapid and non-destructive monitoring of the canopy leaf nitrogen concentration (LNC) in crops is important for precise nitrogen (N) management. Nowadays, there is an urgent need to identify next-generation bio-physical variable retrieval algorithms that can be incorporated into an operational processing chain for hyperspectral satellite missions. We assessed six retrieval algorithms for estimating LNC from canopy reflectance of winter wheat in eight field experiments. These experiments represented variations in the N application rates, planting densities, ecological sites and cultivars and yielded a total of 821 samples from various places in Jiangsu, China over nine consecutive years. Based on the reflectance spectra and their first derivatives, six methods using different numbers of wavelengths were applied to construct predictive models for estimating wheat LNC, including continuum removal (CR), vegetation indices (VIs), stepwise multiple linear regression (SMLR), partial least squares regression (PLSR), artificial neural networks (ANNs), and support vector machines (SVMs). To assess the performance of these six methods, we provided a systematic evaluation of the estimation accuracies using the six metrics that were the coefficients of determination for the calibration (R2C) and validation (R2V) sets, the root mean square errors of prediction (RMSEP) for the calibration and validation sets, the ratio of prediction to deviation (RPD), the computational efficiency (CE) and the complexity level (CL). The following results were obtained: (1) For the VIs method, SAVI(R1200, R705) produced a more accurate estimation of the LNC than other indices, with R²C, R²V, RMSEP, RPD and CE values of 0.844, 0.795, 0.384, 2.005 and 0.10 min, respectively; (2) For the SMLR, PLSR, ANNs and SVMs methods, the SVMs using the first derivative canopy spectra (SVM-FDS) offered the best accuracy in terms of R²C, R²V, RMSEP, RPD, and CE, at 0.96, 0.78, 0.37, 2.02, and 21.17, respectively; (3) The PLSR-FDS, ANN-OS and SVM-FDS methods yield similar accuracies if the CE and CL are not considered, however, ANNs and SVMs performed better on calibration set than the validation set which indicate that we should take more caution with the two methods for over-fitting. Except PLS method, the performance for most methods did not enhance when the spectrum were operated by the first derivative. Moreover, the evaluation of the robustness demonstrates that SVM method may be better suited than the other methods to cope with potential confounding factors for most varieties, ecological site and growth stage; (4) The prediction accuracy was found to be higher when more wavelengths were used, though at the cost of a lower CE. The findings are of interest to the remote sensing community for the development of improved inversion schemes for hyperspectral applications concerning other types of vegetation. The examples provided in this paper may also serve to illustrate the advantages and shortcomings of empirical hyperspectral models for mapping important vegetation biophysical properties of other crops.
topic six algorithms
comparative analysis
number of wavelengths
leaf nitrogen concentration
monitoring accuracy
winter wheat
url http://www.mdpi.com/2072-4292/7/11/14939
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spelling doaj-486f54d865934a79883b42c9eb89b2c62020-11-24T22:33:43ZengMDPI AGRemote Sensing2072-42922015-11-01711149391496610.3390/rs71114939rs71114939Evaluation of Six Algorithms to Monitor Wheat Leaf Nitrogen ConcentrationXia Yao0Yu Huang1Guiyan Shang2Chen Zhou3Tao Cheng4Yongchao Tian5Weixing Cao6Yan Zhu7National Engineering and Technology Center for Information Agriculture, Nanjing Agricultural University, Nanjing 210095, ChinaNational Engineering and Technology Center for Information Agriculture, Nanjing Agricultural University, Nanjing 210095, ChinaNational Engineering and Technology Center for Information Agriculture, Nanjing Agricultural University, Nanjing 210095, ChinaNational Engineering and Technology Center for Information Agriculture, Nanjing Agricultural University, Nanjing 210095, ChinaNational Engineering and Technology Center for Information Agriculture, Nanjing Agricultural University, Nanjing 210095, ChinaNational Engineering and Technology Center for Information Agriculture, Nanjing Agricultural University, Nanjing 210095, ChinaNational Engineering and Technology Center for Information Agriculture, Nanjing Agricultural University, Nanjing 210095, ChinaNational Engineering and Technology Center for Information Agriculture, Nanjing Agricultural University, Nanjing 210095, ChinaThe rapid and non-destructive monitoring of the canopy leaf nitrogen concentration (LNC) in crops is important for precise nitrogen (N) management. Nowadays, there is an urgent need to identify next-generation bio-physical variable retrieval algorithms that can be incorporated into an operational processing chain for hyperspectral satellite missions. We assessed six retrieval algorithms for estimating LNC from canopy reflectance of winter wheat in eight field experiments. These experiments represented variations in the N application rates, planting densities, ecological sites and cultivars and yielded a total of 821 samples from various places in Jiangsu, China over nine consecutive years. Based on the reflectance spectra and their first derivatives, six methods using different numbers of wavelengths were applied to construct predictive models for estimating wheat LNC, including continuum removal (CR), vegetation indices (VIs), stepwise multiple linear regression (SMLR), partial least squares regression (PLSR), artificial neural networks (ANNs), and support vector machines (SVMs). To assess the performance of these six methods, we provided a systematic evaluation of the estimation accuracies using the six metrics that were the coefficients of determination for the calibration (R2C) and validation (R2V) sets, the root mean square errors of prediction (RMSEP) for the calibration and validation sets, the ratio of prediction to deviation (RPD), the computational efficiency (CE) and the complexity level (CL). The following results were obtained: (1) For the VIs method, SAVI(R1200, R705) produced a more accurate estimation of the LNC than other indices, with R²C, R²V, RMSEP, RPD and CE values of 0.844, 0.795, 0.384, 2.005 and 0.10 min, respectively; (2) For the SMLR, PLSR, ANNs and SVMs methods, the SVMs using the first derivative canopy spectra (SVM-FDS) offered the best accuracy in terms of R²C, R²V, RMSEP, RPD, and CE, at 0.96, 0.78, 0.37, 2.02, and 21.17, respectively; (3) The PLSR-FDS, ANN-OS and SVM-FDS methods yield similar accuracies if the CE and CL are not considered, however, ANNs and SVMs performed better on calibration set than the validation set which indicate that we should take more caution with the two methods for over-fitting. Except PLS method, the performance for most methods did not enhance when the spectrum were operated by the first derivative. Moreover, the evaluation of the robustness demonstrates that SVM method may be better suited than the other methods to cope with potential confounding factors for most varieties, ecological site and growth stage; (4) The prediction accuracy was found to be higher when more wavelengths were used, though at the cost of a lower CE. The findings are of interest to the remote sensing community for the development of improved inversion schemes for hyperspectral applications concerning other types of vegetation. The examples provided in this paper may also serve to illustrate the advantages and shortcomings of empirical hyperspectral models for mapping important vegetation biophysical properties of other crops.http://www.mdpi.com/2072-4292/7/11/14939six algorithmscomparative analysisnumber of wavelengthsleaf nitrogen concentrationmonitoring accuracywinter wheat