Virgibacillus ihumii sp. nov., a new bacterium isolated from the stool of healthy African children

Virgibacillus ihumii sp. nov., a new bacterium isolated from the stool of healthy African children

During a case–control study on severe acute malnutrition, strain Marseille-Q1233 was isolated. It is a Gram-positive, rod-shaped and halophilic bacillus isolated from a stool sample of Malian child under the age of 5. The fatty acid profile of the strain consisted of C15:0-anteiso and C14:0-iso as m...

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Main Authors: A. Camara, S. Konate, C.I. Lo, E. Kuete, M. Sarr, N. Amsrtong, S. Niare, M.A. Thera, F. Fenollar, D. Raoult, M. Million
Format: Article
Language:English
Published: Elsevier 2020-11-01
Series:New Microbes and New Infections
Subjects:
Culturomics
Mali
severe acute malnutrition
taxonogenomics
Virgibacillus ihumii sp. nov.
Online Access:http://www.sciencedirect.com/science/article/pii/S2052297520301426
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spelling doaj-47b077aebe9d4336aa4050ab1d22fd562020-12-27T04:29:32ZengElsevierNew Microbes and New Infections2052-29752020-11-0138100790Virgibacillus ihumii sp. nov., a new bacterium isolated from the stool of healthy African childrenA. Camara0S. Konate1C.I. Lo2E. Kuete3M. Sarr4N. Amsrtong5S. Niare6M.A. Thera7F. Fenollar8D. Raoult9M. Million10Aix-Marseille Université, IRD, APHM, MEФI, Marseille, France; IHU-Méditerranée Infection, Marseille, France; Université des Sciences, des Techniques et des Technologies de Bamako, Bamako, MaliAix-Marseille Université, IRD, APHM, MEФI, Marseille, France; IHU-Méditerranée Infection, Marseille, France; Université des Sciences, des Techniques et des Technologies de Bamako, Bamako, MaliIHU-Méditerranée Infection, Marseille, France; Aix-Marseille Université, IRD, APHM, SSA, VITROME, Marseille, FranceAix-Marseille Université, IRD, APHM, MEФI, Marseille, France; IHU-Méditerranée Infection, Marseille, FranceAix-Marseille Université, IRD, APHM, MEФI, Marseille, France; IHU-Méditerranée Infection, Marseille, FranceAix-Marseille Université, IRD, APHM, MEФI, Marseille, France; IHU-Méditerranée Infection, Marseille, FranceUniversité des Sciences, des Techniques et des Technologies de Bamako, Bamako, MaliUniversité des Sciences, des Techniques et des Technologies de Bamako, Bamako, MaliIHU-Méditerranée Infection, Marseille, France; Aix-Marseille Université, IRD, APHM, SSA, VITROME, Marseille, FranceAix-Marseille Université, IRD, APHM, MEФI, Marseille, France; IHU-Méditerranée Infection, Marseille, FranceAix-Marseille Université, IRD, APHM, MEФI, Marseille, France; IHU-Méditerranée Infection, Marseille, France; Corresponding author: M. Million, Institut Hospitalo-Universitaire Méditerranée-Infection, 19-21 Boulevard Jean Moulin, 13385, Marseille Cedex 05, France.During a case–control study on severe acute malnutrition, strain Marseille-Q1233 was isolated. It is a Gram-positive, rod-shaped and halophilic bacillus isolated from a stool sample of Malian child under the age of 5. The fatty acid profile of the strain consisted of C15:0-anteiso and C14:0-iso as major components. Digital DNA-DNA hybridization and average nucleotide identity calculation showed 23.10% and 80.81% similarity respectively between strain Marseille-Q1233 and Virgibacillus siamensis strain Marseille-P2607, the phylogenetically closely related species with standing in nomenclature. On the basis of these results, we report the description of Virgibacillus ihumii sp. nov. strain Marseille-Q1233 as a new bacterial species.http://www.sciencedirect.com/science/article/pii/S2052297520301426CulturomicsMalisevere acute malnutritiontaxonogenomicsVirgibacillus ihumii sp. nov.
collection DOAJ
language English
format Article
sources DOAJ
author A. Camara
S. Konate
C.I. Lo
E. Kuete
M. Sarr
N. Amsrtong
S. Niare
M.A. Thera
F. Fenollar
D. Raoult
M. Million
spellingShingle A. Camara
S. Konate
C.I. Lo
E. Kuete
M. Sarr
N. Amsrtong
S. Niare
M.A. Thera
F. Fenollar
D. Raoult
M. Million
Virgibacillus ihumii sp. nov., a new bacterium isolated from the stool of healthy African children
New Microbes and New Infections
Culturomics
Mali
severe acute malnutrition
taxonogenomics
Virgibacillus ihumii sp. nov.
author_facet A. Camara
S. Konate
C.I. Lo
E. Kuete
M. Sarr
N. Amsrtong
S. Niare
M.A. Thera
F. Fenollar
D. Raoult
M. Million
author_sort A. Camara
title Virgibacillus ihumii sp. nov., a new bacterium isolated from the stool of healthy African children
title_short Virgibacillus ihumii sp. nov., a new bacterium isolated from the stool of healthy African children
title_full Virgibacillus ihumii sp. nov., a new bacterium isolated from the stool of healthy African children
title_fullStr Virgibacillus ihumii sp. nov., a new bacterium isolated from the stool of healthy African children
title_full_unstemmed Virgibacillus ihumii sp. nov., a new bacterium isolated from the stool of healthy African children
title_sort virgibacillus ihumii sp. nov., a new bacterium isolated from the stool of healthy african children
publisher Elsevier
series New Microbes and New Infections
issn 2052-2975
publishDate 2020-11-01
description During a case–control study on severe acute malnutrition, strain Marseille-Q1233 was isolated. It is a Gram-positive, rod-shaped and halophilic bacillus isolated from a stool sample of Malian child under the age of 5. The fatty acid profile of the strain consisted of C15:0-anteiso and C14:0-iso as major components. Digital DNA-DNA hybridization and average nucleotide identity calculation showed 23.10% and 80.81% similarity respectively between strain Marseille-Q1233 and Virgibacillus siamensis strain Marseille-P2607, the phylogenetically closely related species with standing in nomenclature. On the basis of these results, we report the description of Virgibacillus ihumii sp. nov. strain Marseille-Q1233 as a new bacterial species.
topic Culturomics
Mali
severe acute malnutrition
taxonogenomics
Virgibacillus ihumii sp. nov.
url http://www.sciencedirect.com/science/article/pii/S2052297520301426
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