Archaeal Life on Tangkuban Perahu-Sampling and Culture Growth in Indonesian Laboratories

The aim of the expedition to Tangkuban Perahu, West Java was to obtain archaeal samples from the solfatara fields located in Domas crater. This was one of the places, where scientists from the University of Regensburg Germany had formerly isolated Indonesian archaea, especially Thermoplasma and Sulf...

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Main Authors: SRI HANDAYANI, IMAN SANTOSO, HANS-JOACHIM FREISLEBEN, HARALD HUBER, ANDI, FERY ARDIANSYAH, CENMI MULYANTO, ZESSINDA LUTHFA, ROSARI SALEH, SERUNI KUSUMA UDYANINGSIH FREISLEBEN, SEPTELIA INAWATI WANANDI, MICHAEL THOMM
Format: Article
Language:English
Published: Bogor Agricultural University 2012-09-01
Series:Hayati Journal of Biosciences
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S1978301916301498
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spelling doaj-46e6ee01e07d4294970fff09711183b82020-11-24T21:38:52ZengBogor Agricultural UniversityHayati Journal of Biosciences1978-30192012-09-0119315015410.4308/hjb.19.3.150Archaeal Life on Tangkuban Perahu-Sampling and Culture Growth in Indonesian LaboratoriesSRI HANDAYANI0IMAN SANTOSO1HANS-JOACHIM FREISLEBEN2HARALD HUBER3ANDI4FERY ARDIANSYAH5CENMI MULYANTO6ZESSINDA LUTHFA7ROSARI SALEH8SERUNI KUSUMA UDYANINGSIH FREISLEBEN9SEPTELIA INAWATI WANANDI10MICHAEL THOMM11Faculty of Mathematics and Natural Sciences, Universitas Indonesia, Jakarta-Depok, Jakarta 10430, IndonesiaFaculty of Mathematics and Natural Sciences, Universitas Indonesia, Jakarta-Depok, Jakarta 10430, IndonesiaFaculty of Medicine, Universitas Indonesia, Jalan Salemba Raya No. 6, Jakarta 10430, IndonesiaDepartment of Microbiology, Archaea Centre, University of Regensburg, GermanyFaculty of Mathematics and Natural Sciences, Universitas Indonesia, Jakarta-Depok, Jakarta 10430, IndonesiaFaculty of Mathematics and Natural Sciences, Universitas Indonesia, Jakarta-Depok, Jakarta 10430, IndonesiaFaculty of Mathematics and Natural Sciences, Universitas Indonesia, Jakarta-Depok, Jakarta 10430, IndonesiaFaculty of Mathematics and Natural Sciences, Universitas Indonesia, Jakarta-Depok, Jakarta 10430, IndonesiaFaculty of Mathematics and Natural Sciences, Universitas Indonesia, Jakarta-Depok, Jakarta 10430, IndonesiaFaculty of Mathematics and Natural Sciences, Universitas Indonesia, Jakarta-Depok, Jakarta 10430, IndonesiaFaculty of Medicine, Universitas Indonesia, Jalan Salemba Raya No. 6, Jakarta 10430, IndonesiaDepartment of Microbiology, Archaea Centre, University of Regensburg, GermanyThe aim of the expedition to Tangkuban Perahu, West Java was to obtain archaeal samples from the solfatara fields located in Domas crater. This was one of the places, where scientists from the University of Regensburg Germany had formerly isolated Indonesian archaea, especially Thermoplasma and Sulfolobus species but not fully characterized. We collected five samples from mud holes with temperatures from 57 to 88 °C and pH of 1.5-2. A portion of each sample was grown at the University of Regensburg in modified Allen's medium at 80 °C. From four out of five samples enrichment cultures were obtained, autotrophically on elemental sulphur and heterotrophically on sulfur and yeast extract; electron micrographs are presented. In the laboratories of Universitas Indonesia the isolates were cultured at 55-60 °C in order to grow tetraetherlipid synthesizing archaea, both Thermoplasmatales and Sulfolobales. Here, we succeeded to culture the same type of archaeal cells, which had been cultured in Regensburg, probably a Sulfolobus species and in Freundt's medium, Thermoplasma species. The harvested cells are documented by phase contrast microscope equipped with a digital camera. Our next steps will be to further characterize genetically the cultured cells from Tangkuban Perahu isolates.http://www.sciencedirect.com/science/article/pii/S1978301916301498ArchaeaSulfolobusThermoplasmaTangkuban PerahuIndonesian volcanoestetraether lipid
collection DOAJ
language English
format Article
sources DOAJ
author SRI HANDAYANI
IMAN SANTOSO
HANS-JOACHIM FREISLEBEN
HARALD HUBER
ANDI
FERY ARDIANSYAH
CENMI MULYANTO
ZESSINDA LUTHFA
ROSARI SALEH
SERUNI KUSUMA UDYANINGSIH FREISLEBEN
SEPTELIA INAWATI WANANDI
MICHAEL THOMM
spellingShingle SRI HANDAYANI
IMAN SANTOSO
HANS-JOACHIM FREISLEBEN
HARALD HUBER
ANDI
FERY ARDIANSYAH
CENMI MULYANTO
ZESSINDA LUTHFA
ROSARI SALEH
SERUNI KUSUMA UDYANINGSIH FREISLEBEN
SEPTELIA INAWATI WANANDI
MICHAEL THOMM
Archaeal Life on Tangkuban Perahu-Sampling and Culture Growth in Indonesian Laboratories
Hayati Journal of Biosciences
Archaea
Sulfolobus
Thermoplasma
Tangkuban Perahu
Indonesian volcanoes
tetraether lipid
author_facet SRI HANDAYANI
IMAN SANTOSO
HANS-JOACHIM FREISLEBEN
HARALD HUBER
ANDI
FERY ARDIANSYAH
CENMI MULYANTO
ZESSINDA LUTHFA
ROSARI SALEH
SERUNI KUSUMA UDYANINGSIH FREISLEBEN
SEPTELIA INAWATI WANANDI
MICHAEL THOMM
author_sort SRI HANDAYANI
title Archaeal Life on Tangkuban Perahu-Sampling and Culture Growth in Indonesian Laboratories
title_short Archaeal Life on Tangkuban Perahu-Sampling and Culture Growth in Indonesian Laboratories
title_full Archaeal Life on Tangkuban Perahu-Sampling and Culture Growth in Indonesian Laboratories
title_fullStr Archaeal Life on Tangkuban Perahu-Sampling and Culture Growth in Indonesian Laboratories
title_full_unstemmed Archaeal Life on Tangkuban Perahu-Sampling and Culture Growth in Indonesian Laboratories
title_sort archaeal life on tangkuban perahu-sampling and culture growth in indonesian laboratories
publisher Bogor Agricultural University
series Hayati Journal of Biosciences
issn 1978-3019
publishDate 2012-09-01
description The aim of the expedition to Tangkuban Perahu, West Java was to obtain archaeal samples from the solfatara fields located in Domas crater. This was one of the places, where scientists from the University of Regensburg Germany had formerly isolated Indonesian archaea, especially Thermoplasma and Sulfolobus species but not fully characterized. We collected five samples from mud holes with temperatures from 57 to 88 °C and pH of 1.5-2. A portion of each sample was grown at the University of Regensburg in modified Allen's medium at 80 °C. From four out of five samples enrichment cultures were obtained, autotrophically on elemental sulphur and heterotrophically on sulfur and yeast extract; electron micrographs are presented. In the laboratories of Universitas Indonesia the isolates were cultured at 55-60 °C in order to grow tetraetherlipid synthesizing archaea, both Thermoplasmatales and Sulfolobales. Here, we succeeded to culture the same type of archaeal cells, which had been cultured in Regensburg, probably a Sulfolobus species and in Freundt's medium, Thermoplasma species. The harvested cells are documented by phase contrast microscope equipped with a digital camera. Our next steps will be to further characterize genetically the cultured cells from Tangkuban Perahu isolates.
topic Archaea
Sulfolobus
Thermoplasma
Tangkuban Perahu
Indonesian volcanoes
tetraether lipid
url http://www.sciencedirect.com/science/article/pii/S1978301916301498
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