Dermoscopy diagnosis of cancerous lesions utilizing dual deep learning algorithms via visual and audio (sonification) outputs: Laboratory and prospective observational studiesResearch in context

Background: Early diagnosis of skin cancer lesions by dermoscopy, the gold standard in dermatological imaging, calls for a diagnostic upscale. The aim of the study was to improve the accuracy of dermoscopic skin cancer diagnosis through use of novel deep learning (DL) algorithms. An additional sonif...

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Main Authors: B.N. Walker, J.M. Rehg, A. Kalra, R.M. Winters, P. Drews, J. Dascalu, E.O. David, A. Dascalu
Format: Article
Language:English
Published: Elsevier 2019-02-01
Series:EBioMedicine
Online Access:http://www.sciencedirect.com/science/article/pii/S2352396419300337
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spelling doaj-469f6269690e4434b0ff924bba37c5a22020-11-25T01:48:46ZengElsevierEBioMedicine2352-39642019-02-0140176183Dermoscopy diagnosis of cancerous lesions utilizing dual deep learning algorithms via visual and audio (sonification) outputs: Laboratory and prospective observational studiesResearch in contextB.N. Walker0J.M. Rehg1A. Kalra2R.M. Winters3P. Drews4J. Dascalu5E.O. David6A. Dascalu7Sonification Lab, School of Psychology, School of Interactive Computing, Georgia Institute of Technology (Walker BN), GeorgiaSchool of Interactive Computing, Georgia Institute of Technology, Atlanta, GeorgiaHoplabs, Atlanta, GeorgiaInstitute of GT Sonification Lab, Georgia Technology, Atlanta, GeorgiaInstitute for Robotics and Intelligent Machines, Georgia Institute of Technology, Atlanta, GeorgiaSackler School of Medicine, Tel Aviv University, Tel Aviv, IsraelDepartment of Computer Science, Bar-Ilan University, Ramat-Gan, IsraelDepartment of Physiology and Pharmacology, Sackler School of Medicine, Tel Aviv University, Tel Aviv, Israel; Corresponding author.Background: Early diagnosis of skin cancer lesions by dermoscopy, the gold standard in dermatological imaging, calls for a diagnostic upscale. The aim of the study was to improve the accuracy of dermoscopic skin cancer diagnosis through use of novel deep learning (DL) algorithms. An additional sonification-derived diagnostic layer was added to the visual classification to increase sensitivity. Methods: Two parallel studies were conducted: a laboratory retrospective study (LABS, n = 482 biopsies) and a non-interventional prospective observational study (OBS, n = 63 biopsies). A training data set of biopsy-verified reports, normal and cancerous skin lesions (n = 3954), were used to develop a DL classifier exploring visual features (System A). The outputs of the classifier were sonified, i.e. data conversion into sound (System B). Derived sound files were analyzed by a second machine learning classifier, either as raw audio (LABS, OBS) or following conversion into spectrograms (LABS) and by image analysis and human heuristics (OBS). The OBS criteria outcomes were System A specificity and System B sensitivity as raw sounds, spectrogram areas or heuristics. Findings: LABS employed dermoscopies, half benign half malignant, and compared the accuracy of Systems A and B. System A algorithm resulted in a ROC AUC of 0.976 (95% CI, 0.965–0.987). Secondary machine learning analysis of raw sound, FFT and Spectrogram ROC curves resulted in AUC's of 0.931 (95% CI 0.881–0.981), 0.90 (95% CI 0.838–0.963) and 0.988 (CI 95% 0.973–1.001), respectively. OBS analysis of raw sound dermoscopies by the secondary machine learning resulted in a ROC AUC of 0.819 (95% CI, 0.7956 to 0.8406). OBS image analysis of AUC for spectrograms displayed a ROC AUC of 0.808 (CI 95% 0.6945 To 0.9208). By applying a heuristic analysis of Systems A and B a sensitivity of 86% and specificity of 91% were derived in the clinical study. Interpretation: Adding a second stage of processing, which includes a deep learning algorithm of sonification and heuristic inspection with machine learning, significantly improves diagnostic accuracy. A combined two-stage system is expected to assist clinical decisions and de-escalate the current trend of over-diagnosis of skin cancer lesions as pathological. Fund: Bostel Technologies.Trial Registration clinicaltrials.gov Identifier: NCT03362138 Keywords: Skin cancer, Deep learning, Sonification, Artificial intelligence, Dermoscopy, Melanoma, Telemedicinehttp://www.sciencedirect.com/science/article/pii/S2352396419300337
collection DOAJ
language English
format Article
sources DOAJ
author B.N. Walker
J.M. Rehg
A. Kalra
R.M. Winters
P. Drews
J. Dascalu
E.O. David
A. Dascalu
spellingShingle B.N. Walker
J.M. Rehg
A. Kalra
R.M. Winters
P. Drews
J. Dascalu
E.O. David
A. Dascalu
Dermoscopy diagnosis of cancerous lesions utilizing dual deep learning algorithms via visual and audio (sonification) outputs: Laboratory and prospective observational studiesResearch in context
EBioMedicine
author_facet B.N. Walker
J.M. Rehg
A. Kalra
R.M. Winters
P. Drews
J. Dascalu
E.O. David
A. Dascalu
author_sort B.N. Walker
title Dermoscopy diagnosis of cancerous lesions utilizing dual deep learning algorithms via visual and audio (sonification) outputs: Laboratory and prospective observational studiesResearch in context
title_short Dermoscopy diagnosis of cancerous lesions utilizing dual deep learning algorithms via visual and audio (sonification) outputs: Laboratory and prospective observational studiesResearch in context
title_full Dermoscopy diagnosis of cancerous lesions utilizing dual deep learning algorithms via visual and audio (sonification) outputs: Laboratory and prospective observational studiesResearch in context
title_fullStr Dermoscopy diagnosis of cancerous lesions utilizing dual deep learning algorithms via visual and audio (sonification) outputs: Laboratory and prospective observational studiesResearch in context
title_full_unstemmed Dermoscopy diagnosis of cancerous lesions utilizing dual deep learning algorithms via visual and audio (sonification) outputs: Laboratory and prospective observational studiesResearch in context
title_sort dermoscopy diagnosis of cancerous lesions utilizing dual deep learning algorithms via visual and audio (sonification) outputs: laboratory and prospective observational studiesresearch in context
publisher Elsevier
series EBioMedicine
issn 2352-3964
publishDate 2019-02-01
description Background: Early diagnosis of skin cancer lesions by dermoscopy, the gold standard in dermatological imaging, calls for a diagnostic upscale. The aim of the study was to improve the accuracy of dermoscopic skin cancer diagnosis through use of novel deep learning (DL) algorithms. An additional sonification-derived diagnostic layer was added to the visual classification to increase sensitivity. Methods: Two parallel studies were conducted: a laboratory retrospective study (LABS, n = 482 biopsies) and a non-interventional prospective observational study (OBS, n = 63 biopsies). A training data set of biopsy-verified reports, normal and cancerous skin lesions (n = 3954), were used to develop a DL classifier exploring visual features (System A). The outputs of the classifier were sonified, i.e. data conversion into sound (System B). Derived sound files were analyzed by a second machine learning classifier, either as raw audio (LABS, OBS) or following conversion into spectrograms (LABS) and by image analysis and human heuristics (OBS). The OBS criteria outcomes were System A specificity and System B sensitivity as raw sounds, spectrogram areas or heuristics. Findings: LABS employed dermoscopies, half benign half malignant, and compared the accuracy of Systems A and B. System A algorithm resulted in a ROC AUC of 0.976 (95% CI, 0.965–0.987). Secondary machine learning analysis of raw sound, FFT and Spectrogram ROC curves resulted in AUC's of 0.931 (95% CI 0.881–0.981), 0.90 (95% CI 0.838–0.963) and 0.988 (CI 95% 0.973–1.001), respectively. OBS analysis of raw sound dermoscopies by the secondary machine learning resulted in a ROC AUC of 0.819 (95% CI, 0.7956 to 0.8406). OBS image analysis of AUC for spectrograms displayed a ROC AUC of 0.808 (CI 95% 0.6945 To 0.9208). By applying a heuristic analysis of Systems A and B a sensitivity of 86% and specificity of 91% were derived in the clinical study. Interpretation: Adding a second stage of processing, which includes a deep learning algorithm of sonification and heuristic inspection with machine learning, significantly improves diagnostic accuracy. A combined two-stage system is expected to assist clinical decisions and de-escalate the current trend of over-diagnosis of skin cancer lesions as pathological. Fund: Bostel Technologies.Trial Registration clinicaltrials.gov Identifier: NCT03362138 Keywords: Skin cancer, Deep learning, Sonification, Artificial intelligence, Dermoscopy, Melanoma, Telemedicine
url http://www.sciencedirect.com/science/article/pii/S2352396419300337
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