Super-Enhancers and CTCF in Early Embryonic Cell Fate Decisions

Cell fate decisions are the backbone of many developmental and disease processes. In early mammalian development, precise gene expression changes underly the rapid division of a single cell that leads to the embryo and are critically dependent on autonomous cell changes in gene expression. To unders...

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Main Authors: Puja Agrawal, Sridhar Rao
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-03-01
Series:Frontiers in Cell and Developmental Biology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fcell.2021.653669/full
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spelling doaj-46262cd30211487fb0c26aa505d0737f2021-03-25T08:13:09ZengFrontiers Media S.A.Frontiers in Cell and Developmental Biology2296-634X2021-03-01910.3389/fcell.2021.653669653669Super-Enhancers and CTCF in Early Embryonic Cell Fate DecisionsPuja Agrawal0Puja Agrawal1Sridhar Rao2Sridhar Rao3Sridhar Rao4Department of Cell Biology, Neurobiology, and Anatomy, Medical College of Wisconsin, Milwaukee, WI, United StatesVersiti Blood Research Institute, Milwaukee, WI, United StatesDepartment of Cell Biology, Neurobiology, and Anatomy, Medical College of Wisconsin, Milwaukee, WI, United StatesVersiti Blood Research Institute, Milwaukee, WI, United StatesDepartment of Pediatrics, Medical College of Wisconsin, Milwaukee, WI, United StatesCell fate decisions are the backbone of many developmental and disease processes. In early mammalian development, precise gene expression changes underly the rapid division of a single cell that leads to the embryo and are critically dependent on autonomous cell changes in gene expression. To understand how these lineage specifications events are mediated, scientists have had to look past protein coding genes to the cis regulatory elements (CREs), including enhancers and insulators, that modulate gene expression. One class of enhancers, termed super-enhancers, is highly active and cell-type specific, implying their critical role in modulating cell-type specific gene expression. Deletion or mutations within these CREs adversely affect gene expression and development and can cause disease. In this mini-review we discuss recent studies describing the potential roles of two CREs, enhancers and binding sites for CTCF, in early mammalian development.https://www.frontiersin.org/articles/10.3389/fcell.2021.653669/fullCTCFenhancernanogpluripotencyembryonic stem cell
collection DOAJ
language English
format Article
sources DOAJ
author Puja Agrawal
Puja Agrawal
Sridhar Rao
Sridhar Rao
Sridhar Rao
spellingShingle Puja Agrawal
Puja Agrawal
Sridhar Rao
Sridhar Rao
Sridhar Rao
Super-Enhancers and CTCF in Early Embryonic Cell Fate Decisions
Frontiers in Cell and Developmental Biology
CTCF
enhancer
nanog
pluripotency
embryonic stem cell
author_facet Puja Agrawal
Puja Agrawal
Sridhar Rao
Sridhar Rao
Sridhar Rao
author_sort Puja Agrawal
title Super-Enhancers and CTCF in Early Embryonic Cell Fate Decisions
title_short Super-Enhancers and CTCF in Early Embryonic Cell Fate Decisions
title_full Super-Enhancers and CTCF in Early Embryonic Cell Fate Decisions
title_fullStr Super-Enhancers and CTCF in Early Embryonic Cell Fate Decisions
title_full_unstemmed Super-Enhancers and CTCF in Early Embryonic Cell Fate Decisions
title_sort super-enhancers and ctcf in early embryonic cell fate decisions
publisher Frontiers Media S.A.
series Frontiers in Cell and Developmental Biology
issn 2296-634X
publishDate 2021-03-01
description Cell fate decisions are the backbone of many developmental and disease processes. In early mammalian development, precise gene expression changes underly the rapid division of a single cell that leads to the embryo and are critically dependent on autonomous cell changes in gene expression. To understand how these lineage specifications events are mediated, scientists have had to look past protein coding genes to the cis regulatory elements (CREs), including enhancers and insulators, that modulate gene expression. One class of enhancers, termed super-enhancers, is highly active and cell-type specific, implying their critical role in modulating cell-type specific gene expression. Deletion or mutations within these CREs adversely affect gene expression and development and can cause disease. In this mini-review we discuss recent studies describing the potential roles of two CREs, enhancers and binding sites for CTCF, in early mammalian development.
topic CTCF
enhancer
nanog
pluripotency
embryonic stem cell
url https://www.frontiersin.org/articles/10.3389/fcell.2021.653669/full
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