Quantitative Structure Activity Relationship (QSAR) and Molecular Docking Study of Some Pyrrolones Antimalarial Agents against Plasmodium Falciparum

The increase in multidrug resistance malaria cases necessitates the need to search for new cost effective drugs. QSAR and molecular docking studies were performed on a data set of forty nine Pyrrolones antimalarial agents against Plasmodium falciparum. Forty two molecules were used as training set a...

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Main Authors: Zaharaddeen Shehu, Adamu Uzairu, Balarabe Sagagi
Format: Article
Language:English
Published: Turkish Chemical Society 2018-01-01
Series:Journal of the Turkish Chemical Society, Section A: Chemistry
Subjects:
Online Access:http://dergipark.gov.tr/jotcsa/issue/33408/346661
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spelling doaj-452c03b808904fd6a965a5cb189d4bb02020-11-24T21:02:03ZengTurkish Chemical SocietyJournal of the Turkish Chemical Society, Section A: Chemistry2149-01202149-01202018-01-015256958410.18596/jotcsa.346661Quantitative Structure Activity Relationship (QSAR) and Molecular Docking Study of Some Pyrrolones Antimalarial Agents against Plasmodium FalciparumZaharaddeen ShehuAdamu UzairuBalarabe SagagiThe increase in multidrug resistance malaria cases necessitates the need to search for new cost effective drugs. QSAR and molecular docking studies were performed on a data set of forty nine Pyrrolones antimalarial agents against Plasmodium falciparum. Forty two molecules were used as training set and seven as test set. The molecular descriptors were obtained by Density Functional Theory (DFT) (B3LYP/6-31G**) level of calculation. The QSAR model was built using Genetic Function Algorithm (GFA) method. The model with the best statistical significance (N = 42, R2ext = 0.700, R2 = 0.933, R2a = 0.916, Q2cv = 0.894, LOF = 0.417, Min expt. error for non-significant LOF (95%) = 0.250 was selected. The docking experiment was carried out using AutoDock Vina of PyRx and Discovery Studio Visualizer. Docking analysis revealed that three of the studied compounds with binding affinity values of -10.7 kcal/mol, -10.9 kcal/mol and -11.1 kcal/mol possess higher potency than standard antimalarial drugs with binding affinity of values of -8.8 kcal/mol, -9.5 kcal/mol and -9.0 kcal/mol. It is envisioned that the wealth of information provided by the QSAR and molecular docking results in this study will offer important structural insights for further laboratory experiments in the future design of novel and highly potent antimalarial from Pyrrolones.http://dergipark.gov.tr/jotcsa/issue/33408/346661: Antimalarial agentsDensity Functional TheoryGenetic Function AlgorithmDiscovery Studio Visualizer
collection DOAJ
language English
format Article
sources DOAJ
author Zaharaddeen Shehu
Adamu Uzairu
Balarabe Sagagi
spellingShingle Zaharaddeen Shehu
Adamu Uzairu
Balarabe Sagagi
Quantitative Structure Activity Relationship (QSAR) and Molecular Docking Study of Some Pyrrolones Antimalarial Agents against Plasmodium Falciparum
Journal of the Turkish Chemical Society, Section A: Chemistry
: Antimalarial agents
Density Functional Theory
Genetic Function Algorithm
Discovery Studio Visualizer
author_facet Zaharaddeen Shehu
Adamu Uzairu
Balarabe Sagagi
author_sort Zaharaddeen Shehu
title Quantitative Structure Activity Relationship (QSAR) and Molecular Docking Study of Some Pyrrolones Antimalarial Agents against Plasmodium Falciparum
title_short Quantitative Structure Activity Relationship (QSAR) and Molecular Docking Study of Some Pyrrolones Antimalarial Agents against Plasmodium Falciparum
title_full Quantitative Structure Activity Relationship (QSAR) and Molecular Docking Study of Some Pyrrolones Antimalarial Agents against Plasmodium Falciparum
title_fullStr Quantitative Structure Activity Relationship (QSAR) and Molecular Docking Study of Some Pyrrolones Antimalarial Agents against Plasmodium Falciparum
title_full_unstemmed Quantitative Structure Activity Relationship (QSAR) and Molecular Docking Study of Some Pyrrolones Antimalarial Agents against Plasmodium Falciparum
title_sort quantitative structure activity relationship (qsar) and molecular docking study of some pyrrolones antimalarial agents against plasmodium falciparum
publisher Turkish Chemical Society
series Journal of the Turkish Chemical Society, Section A: Chemistry
issn 2149-0120
2149-0120
publishDate 2018-01-01
description The increase in multidrug resistance malaria cases necessitates the need to search for new cost effective drugs. QSAR and molecular docking studies were performed on a data set of forty nine Pyrrolones antimalarial agents against Plasmodium falciparum. Forty two molecules were used as training set and seven as test set. The molecular descriptors were obtained by Density Functional Theory (DFT) (B3LYP/6-31G**) level of calculation. The QSAR model was built using Genetic Function Algorithm (GFA) method. The model with the best statistical significance (N = 42, R2ext = 0.700, R2 = 0.933, R2a = 0.916, Q2cv = 0.894, LOF = 0.417, Min expt. error for non-significant LOF (95%) = 0.250 was selected. The docking experiment was carried out using AutoDock Vina of PyRx and Discovery Studio Visualizer. Docking analysis revealed that three of the studied compounds with binding affinity values of -10.7 kcal/mol, -10.9 kcal/mol and -11.1 kcal/mol possess higher potency than standard antimalarial drugs with binding affinity of values of -8.8 kcal/mol, -9.5 kcal/mol and -9.0 kcal/mol. It is envisioned that the wealth of information provided by the QSAR and molecular docking results in this study will offer important structural insights for further laboratory experiments in the future design of novel and highly potent antimalarial from Pyrrolones.
topic : Antimalarial agents
Density Functional Theory
Genetic Function Algorithm
Discovery Studio Visualizer
url http://dergipark.gov.tr/jotcsa/issue/33408/346661
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