Glycine insertion modulates the fluorescence properties of Aequorea victoria green fluorescent protein and its variants in their ambient environment

The green fluorescent protein (GFP) derived from Pacific Ocean jellyfish is an essential tool in biology. GFP-solvent interactions can modulate the fluorescent property of GFP. We previously reported that glycine insertion is an effective mutation in the yellow variant of GFP, yellow fluorescent pro...

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Main Authors: Takamitsu J Morikawa, Masayoshi Nishiyama, Keiko Yoshizawa, Hideaki Fujita, Tomonobu M Watanabe
Format: Article
Language:English
Published: The Biophysical Society of Japan 2021-06-01
Series:Biophysics and Physicobiology
Subjects:
Online Access:https://doi.org/10.2142/biophysico.bppb-v18.016
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spelling doaj-44e7bef1f4a34ac2bdaba0298d2507392021-06-21T01:58:28ZengThe Biophysical Society of JapanBiophysics and Physicobiology2189-47792021-06-011810.2142/biophysico.bppb-v18.016Glycine insertion modulates the fluorescence properties of Aequorea victoria green fluorescent protein and its variants in their ambient environmentTakamitsu J Morikawa0Masayoshi Nishiyama1Keiko Yoshizawa2Hideaki Fujita3Tomonobu M Watanabe4Laboratory for Comprehensive Bioimaging, RIKEN Center for Biosystems Dynamics Research (BDR), Kobe, Hyogo 650-0047, JapanDepartment of Physics, Kindai University, Higashiosaka, Osaka 577-8502, JapanLaboratory for Comprehensive Bioimaging, RIKEN Center for Biosystems Dynamics Research (BDR), Kobe, Hyogo 650-0047, JapanLaboratory for Comprehensive Bioimaging, RIKEN Center for Biosystems Dynamics Research (BDR), Kobe, Hyogo 650-0047, JapanLaboratory for Comprehensive Bioimaging, RIKEN Center for Biosystems Dynamics Research (BDR), Kobe, Hyogo 650-0047, JapanThe green fluorescent protein (GFP) derived from Pacific Ocean jellyfish is an essential tool in biology. GFP-solvent interactions can modulate the fluorescent property of GFP. We previously reported that glycine insertion is an effective mutation in the yellow variant of GFP, yellow fluorescent protein (YFP). Glycine insertion into one of the β-strands comprising the barrel structure distorts its structure, allowing water molecules to invade near the chromophore, enhancing hydrostatic pressure or solution hydrophobicity sensitivity. However, the underlying mechanism of how glycine insertion imparts environmental sensitivity to YFP has not been elucidated yet. To unveil the relationship between fluorescence and β-strand distortion, we investigated the effects of glycine insertion on the dependence of the optical properties of GFP variants named enhanced-GFP (eGFP) and its yellow (eYFP) and cyan (eCFP) variants with respect to pH, temperature, pressure, and hydrophobicity. Our results showed that the quantum yield decreased depending on the number of inserted glycines in all variants, and the dependence on pH, temperature, pressure, and hydrophobicity was altered, indicating the invasion of water molecules into the β-barrel. Peak shifts in the emission spectrum were observed in glycine-inserted eGFP, suggesting a change of the electric state in the excited chromophore. A comparative investigation of the spectral shift among variants under different conditions demonstrated that glycine insertion rearranged the hydrogen bond network between His148 and the chromophore. The present results provide important insights for further understanding the fluorescence mechanism in GFPs and suggest that glycine insertion could be a potent approach for investigating the relationship between water molecules and the intra-protein chromophore.https://doi.org/10.2142/biophysico.bppb-v18.016fluorescence spectroscopyph-dependencetemperature-dependencepressure-dependenceethanol concentration-dependence
collection DOAJ
language English
format Article
sources DOAJ
author Takamitsu J Morikawa
Masayoshi Nishiyama
Keiko Yoshizawa
Hideaki Fujita
Tomonobu M Watanabe
spellingShingle Takamitsu J Morikawa
Masayoshi Nishiyama
Keiko Yoshizawa
Hideaki Fujita
Tomonobu M Watanabe
Glycine insertion modulates the fluorescence properties of Aequorea victoria green fluorescent protein and its variants in their ambient environment
Biophysics and Physicobiology
fluorescence spectroscopy
ph-dependence
temperature-dependence
pressure-dependence
ethanol concentration-dependence
author_facet Takamitsu J Morikawa
Masayoshi Nishiyama
Keiko Yoshizawa
Hideaki Fujita
Tomonobu M Watanabe
author_sort Takamitsu J Morikawa
title Glycine insertion modulates the fluorescence properties of Aequorea victoria green fluorescent protein and its variants in their ambient environment
title_short Glycine insertion modulates the fluorescence properties of Aequorea victoria green fluorescent protein and its variants in their ambient environment
title_full Glycine insertion modulates the fluorescence properties of Aequorea victoria green fluorescent protein and its variants in their ambient environment
title_fullStr Glycine insertion modulates the fluorescence properties of Aequorea victoria green fluorescent protein and its variants in their ambient environment
title_full_unstemmed Glycine insertion modulates the fluorescence properties of Aequorea victoria green fluorescent protein and its variants in their ambient environment
title_sort glycine insertion modulates the fluorescence properties of aequorea victoria green fluorescent protein and its variants in their ambient environment
publisher The Biophysical Society of Japan
series Biophysics and Physicobiology
issn 2189-4779
publishDate 2021-06-01
description The green fluorescent protein (GFP) derived from Pacific Ocean jellyfish is an essential tool in biology. GFP-solvent interactions can modulate the fluorescent property of GFP. We previously reported that glycine insertion is an effective mutation in the yellow variant of GFP, yellow fluorescent protein (YFP). Glycine insertion into one of the β-strands comprising the barrel structure distorts its structure, allowing water molecules to invade near the chromophore, enhancing hydrostatic pressure or solution hydrophobicity sensitivity. However, the underlying mechanism of how glycine insertion imparts environmental sensitivity to YFP has not been elucidated yet. To unveil the relationship between fluorescence and β-strand distortion, we investigated the effects of glycine insertion on the dependence of the optical properties of GFP variants named enhanced-GFP (eGFP) and its yellow (eYFP) and cyan (eCFP) variants with respect to pH, temperature, pressure, and hydrophobicity. Our results showed that the quantum yield decreased depending on the number of inserted glycines in all variants, and the dependence on pH, temperature, pressure, and hydrophobicity was altered, indicating the invasion of water molecules into the β-barrel. Peak shifts in the emission spectrum were observed in glycine-inserted eGFP, suggesting a change of the electric state in the excited chromophore. A comparative investigation of the spectral shift among variants under different conditions demonstrated that glycine insertion rearranged the hydrogen bond network between His148 and the chromophore. The present results provide important insights for further understanding the fluorescence mechanism in GFPs and suggest that glycine insertion could be a potent approach for investigating the relationship between water molecules and the intra-protein chromophore.
topic fluorescence spectroscopy
ph-dependence
temperature-dependence
pressure-dependence
ethanol concentration-dependence
url https://doi.org/10.2142/biophysico.bppb-v18.016
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