Statistical Approach to Incorporating Experimental Variability into a Mathematical Model of the Voltage-Gated Na<sup>+</sup> Channel and Human Atrial Action Potential

The voltage-gated Na<sup>+</sup> channel Na<sub>v</sub>1.5 is critical for normal cardiac myocyte excitability. Mathematical models have been widely used to study Na<sub>v</sub>1.5 function and link to a range of cardiac arrhythmias. There is growing appreciation...

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Main Authors: Daniel Gratz, Alexander J Winkle, Seth H Weinberg, Thomas J Hund
Format: Article
Language:English
Published: MDPI AG 2021-06-01
Series:Cells
Subjects:
Online Access:https://www.mdpi.com/2073-4409/10/6/1516
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spelling doaj-441351a248df4b25a6fb400250e6da182021-07-01T00:19:21ZengMDPI AGCells2073-44092021-06-01101516151610.3390/cells10061516Statistical Approach to Incorporating Experimental Variability into a Mathematical Model of the Voltage-Gated Na<sup>+</sup> Channel and Human Atrial Action PotentialDaniel Gratz0Alexander J Winkle1Seth H Weinberg2Thomas J Hund3Department of Biomedical Engineering, College of Engineering, The Ohio State University, Columbus, OH 43210, USADepartment of Biomedical Engineering, College of Engineering, The Ohio State University, Columbus, OH 43210, USADepartment of Biomedical Engineering, College of Engineering, The Ohio State University, Columbus, OH 43210, USADepartment of Biomedical Engineering, College of Engineering, The Ohio State University, Columbus, OH 43210, USAThe voltage-gated Na<sup>+</sup> channel Na<sub>v</sub>1.5 is critical for normal cardiac myocyte excitability. Mathematical models have been widely used to study Na<sub>v</sub>1.5 function and link to a range of cardiac arrhythmias. There is growing appreciation for the importance of incorporating physiological heterogeneity observed even in a healthy population into mathematical models of the cardiac action potential. Here, we apply methods from Bayesian statistics to capture the variability in experimental measurements on human atrial Na<sub>v</sub>1.5 across experimental protocols and labs. This variability was used to define a physiological distribution for model parameters in a novel model formulation of Na<sub>v</sub>1.5, which was then incorporated into an existing human atrial action potential model. Model validation was performed by comparing the simulated distribution of action potential upstroke velocity measurements to experimental measurements from several different sources. Going forward, we hope to apply this approach to other major atrial ion channels to create a comprehensive model of the human atrial AP. We anticipate that such a model will be useful for understanding excitability at the population level, including variable drug response and penetrance of variants linked to inherited cardiac arrhythmia syndromes.https://www.mdpi.com/2073-4409/10/6/1516computational modelelectrophysiologyatrial fibrillationarrhythmiaBayesian statisticsvoltage-gated sodium channel
collection DOAJ
language English
format Article
sources DOAJ
author Daniel Gratz
Alexander J Winkle
Seth H Weinberg
Thomas J Hund
spellingShingle Daniel Gratz
Alexander J Winkle
Seth H Weinberg
Thomas J Hund
Statistical Approach to Incorporating Experimental Variability into a Mathematical Model of the Voltage-Gated Na<sup>+</sup> Channel and Human Atrial Action Potential
Cells
computational model
electrophysiology
atrial fibrillation
arrhythmia
Bayesian statistics
voltage-gated sodium channel
author_facet Daniel Gratz
Alexander J Winkle
Seth H Weinberg
Thomas J Hund
author_sort Daniel Gratz
title Statistical Approach to Incorporating Experimental Variability into a Mathematical Model of the Voltage-Gated Na<sup>+</sup> Channel and Human Atrial Action Potential
title_short Statistical Approach to Incorporating Experimental Variability into a Mathematical Model of the Voltage-Gated Na<sup>+</sup> Channel and Human Atrial Action Potential
title_full Statistical Approach to Incorporating Experimental Variability into a Mathematical Model of the Voltage-Gated Na<sup>+</sup> Channel and Human Atrial Action Potential
title_fullStr Statistical Approach to Incorporating Experimental Variability into a Mathematical Model of the Voltage-Gated Na<sup>+</sup> Channel and Human Atrial Action Potential
title_full_unstemmed Statistical Approach to Incorporating Experimental Variability into a Mathematical Model of the Voltage-Gated Na<sup>+</sup> Channel and Human Atrial Action Potential
title_sort statistical approach to incorporating experimental variability into a mathematical model of the voltage-gated na<sup>+</sup> channel and human atrial action potential
publisher MDPI AG
series Cells
issn 2073-4409
publishDate 2021-06-01
description The voltage-gated Na<sup>+</sup> channel Na<sub>v</sub>1.5 is critical for normal cardiac myocyte excitability. Mathematical models have been widely used to study Na<sub>v</sub>1.5 function and link to a range of cardiac arrhythmias. There is growing appreciation for the importance of incorporating physiological heterogeneity observed even in a healthy population into mathematical models of the cardiac action potential. Here, we apply methods from Bayesian statistics to capture the variability in experimental measurements on human atrial Na<sub>v</sub>1.5 across experimental protocols and labs. This variability was used to define a physiological distribution for model parameters in a novel model formulation of Na<sub>v</sub>1.5, which was then incorporated into an existing human atrial action potential model. Model validation was performed by comparing the simulated distribution of action potential upstroke velocity measurements to experimental measurements from several different sources. Going forward, we hope to apply this approach to other major atrial ion channels to create a comprehensive model of the human atrial AP. We anticipate that such a model will be useful for understanding excitability at the population level, including variable drug response and penetrance of variants linked to inherited cardiac arrhythmia syndromes.
topic computational model
electrophysiology
atrial fibrillation
arrhythmia
Bayesian statistics
voltage-gated sodium channel
url https://www.mdpi.com/2073-4409/10/6/1516
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