Zic Family Member 2 (ZIC2): a Potential Diagnostic and Prognostic Biomarker for Pan-Cancer

Background: As a transcription factor, Zinc finger protein ZIC2 can interact with various DNAs and proteins. Current studies have shown that ZIC2 plays an oncogene role in various cancers. In this study, we systematically characterize the prevalence and predictive value of ZIC2 expression across mul...

Full description

Bibliographic Details
Main Authors: Zhengtong Lv, Lin Qi, Xiheng Hu, Miao Mo, Huichuan Jiang, Benyi Fan, Yuan Li
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-02-01
Series:Frontiers in Molecular Biosciences
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fmolb.2021.631067/full
id doaj-438add7599864f6da6db54551c7334a6
record_format Article
spelling doaj-438add7599864f6da6db54551c7334a62021-02-16T05:06:16ZengFrontiers Media S.A.Frontiers in Molecular Biosciences2296-889X2021-02-01810.3389/fmolb.2021.631067631067Zic Family Member 2 (ZIC2): a Potential Diagnostic and Prognostic Biomarker for Pan-CancerZhengtong Lv0Zhengtong Lv1Lin Qi2Xiheng Hu3Miao Mo4Huichuan Jiang5Benyi Fan6Yuan Li7Department of Urology, Beijing Hospital, National Center of Gerontology, Institute of Geriatric Medicine, Chinese Academy of Medical Sciences, Beijing, ChinaGraduate School of Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, ChinaDepartment of Urology, Xiangya Hospital, Central South University, Changsha, ChinaDepartment of Urology, Xiangya Hospital, Central South University, Changsha, ChinaDepartment of Urology, Xiangya Hospital, Central South University, Changsha, ChinaDepartment of Urology, Xiangya Hospital, Central South University, Changsha, ChinaDepartment of Urology, Xiangya Hospital, Central South University, Changsha, ChinaDepartment of Urology, Xiangya Hospital, Central South University, Changsha, ChinaBackground: As a transcription factor, Zinc finger protein ZIC2 can interact with various DNAs and proteins. Current studies have shown that ZIC2 plays an oncogene role in various cancers. In this study, we systematically characterize the prevalence and predictive value of ZIC2 expression across multiple cancer types.Methods: We mined several public databases, including Oncomine, the Cancer Genome Atlas (TCGA), cBioPortal, Kaplan-Meier Plotter and PrognoScan to evaluated the differentially expressed ZIC2 between tumor samples and normal control samples in pan-cancner, and then explored the association between ZIC2 expression and patient survival, prognosis and clinicopathologic stage. We also analyzed the relationship between tumor mutation burden (TMB), microsatellite instability (MSI), tumor microenvironment, tumor- and immune-related genes and ZIC2 expression. Finally, we explored the potential signaling pathway mechanism through gene set enrichment analysis (GSEA).Results: ZIC2 expression was higher in most cancer tissues compared with adjacent normal tissues. High ZIC2 expression was associated with worse prognosis and a higher clinicopathologic stage. ZIC2 expression was strongly associated with the TMB, MSI, tumor microenvironment and tumor- and immune-related genes. The GSEA revealed that multiple tumor- and immune-related pathways were differentially enriched in ZIC2 high or low expression phenotype.Conclusion: ZIC2 expression may be a potential prognostic molecular biomarker of poor survival in pan-cancer and may act as an oncogene with a strong effect in the processes of tumorigenesis and progression.https://www.frontiersin.org/articles/10.3389/fmolb.2021.631067/fullpan-cancerZic2prognosisTCGAbiomarker
collection DOAJ
language English
format Article
sources DOAJ
author Zhengtong Lv
Zhengtong Lv
Lin Qi
Xiheng Hu
Miao Mo
Huichuan Jiang
Benyi Fan
Yuan Li
spellingShingle Zhengtong Lv
Zhengtong Lv
Lin Qi
Xiheng Hu
Miao Mo
Huichuan Jiang
Benyi Fan
Yuan Li
Zic Family Member 2 (ZIC2): a Potential Diagnostic and Prognostic Biomarker for Pan-Cancer
Frontiers in Molecular Biosciences
pan-cancer
Zic2
prognosis
TCGA
biomarker
author_facet Zhengtong Lv
Zhengtong Lv
Lin Qi
Xiheng Hu
Miao Mo
Huichuan Jiang
Benyi Fan
Yuan Li
author_sort Zhengtong Lv
title Zic Family Member 2 (ZIC2): a Potential Diagnostic and Prognostic Biomarker for Pan-Cancer
title_short Zic Family Member 2 (ZIC2): a Potential Diagnostic and Prognostic Biomarker for Pan-Cancer
title_full Zic Family Member 2 (ZIC2): a Potential Diagnostic and Prognostic Biomarker for Pan-Cancer
title_fullStr Zic Family Member 2 (ZIC2): a Potential Diagnostic and Prognostic Biomarker for Pan-Cancer
title_full_unstemmed Zic Family Member 2 (ZIC2): a Potential Diagnostic and Prognostic Biomarker for Pan-Cancer
title_sort zic family member 2 (zic2): a potential diagnostic and prognostic biomarker for pan-cancer
publisher Frontiers Media S.A.
series Frontiers in Molecular Biosciences
issn 2296-889X
publishDate 2021-02-01
description Background: As a transcription factor, Zinc finger protein ZIC2 can interact with various DNAs and proteins. Current studies have shown that ZIC2 plays an oncogene role in various cancers. In this study, we systematically characterize the prevalence and predictive value of ZIC2 expression across multiple cancer types.Methods: We mined several public databases, including Oncomine, the Cancer Genome Atlas (TCGA), cBioPortal, Kaplan-Meier Plotter and PrognoScan to evaluated the differentially expressed ZIC2 between tumor samples and normal control samples in pan-cancner, and then explored the association between ZIC2 expression and patient survival, prognosis and clinicopathologic stage. We also analyzed the relationship between tumor mutation burden (TMB), microsatellite instability (MSI), tumor microenvironment, tumor- and immune-related genes and ZIC2 expression. Finally, we explored the potential signaling pathway mechanism through gene set enrichment analysis (GSEA).Results: ZIC2 expression was higher in most cancer tissues compared with adjacent normal tissues. High ZIC2 expression was associated with worse prognosis and a higher clinicopathologic stage. ZIC2 expression was strongly associated with the TMB, MSI, tumor microenvironment and tumor- and immune-related genes. The GSEA revealed that multiple tumor- and immune-related pathways were differentially enriched in ZIC2 high or low expression phenotype.Conclusion: ZIC2 expression may be a potential prognostic molecular biomarker of poor survival in pan-cancer and may act as an oncogene with a strong effect in the processes of tumorigenesis and progression.
topic pan-cancer
Zic2
prognosis
TCGA
biomarker
url https://www.frontiersin.org/articles/10.3389/fmolb.2021.631067/full
work_keys_str_mv AT zhengtonglv zicfamilymember2zic2apotentialdiagnosticandprognosticbiomarkerforpancancer
AT zhengtonglv zicfamilymember2zic2apotentialdiagnosticandprognosticbiomarkerforpancancer
AT linqi zicfamilymember2zic2apotentialdiagnosticandprognosticbiomarkerforpancancer
AT xihenghu zicfamilymember2zic2apotentialdiagnosticandprognosticbiomarkerforpancancer
AT miaomo zicfamilymember2zic2apotentialdiagnosticandprognosticbiomarkerforpancancer
AT huichuanjiang zicfamilymember2zic2apotentialdiagnosticandprognosticbiomarkerforpancancer
AT benyifan zicfamilymember2zic2apotentialdiagnosticandprognosticbiomarkerforpancancer
AT yuanli zicfamilymember2zic2apotentialdiagnosticandprognosticbiomarkerforpancancer
_version_ 1724268017091608576