Novel Butane-Oxidizing Bacteria and Diversity of bmoX Genes in Puguang Gas Field
To investigate the diversity of butane-oxidizing bacteria in soils contaminated by long-term light hydrocarbon microseepage and the influence of butane on the soil microbial community, a quantitative study and identification of butane-oxidizing bacteria (BOB) in soils at the Puguang gas field were p...
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doaj-43640694ca8f4fe19d4366c43e1706982020-11-24T23:10:18ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2018-07-01910.3389/fmicb.2018.01576376328Novel Butane-Oxidizing Bacteria and Diversity of bmoX Genes in Puguang Gas FieldYue Deng0Chunping Deng1Jinshui Yang2Baozhen Li3Entao Wang4Hongli Yuan5State Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, Beijing, ChinaState Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, Beijing, ChinaState Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, Beijing, ChinaState Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, Beijing, ChinaDepartamento de Microbiología, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Mexico City, MexicoState Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, Beijing, ChinaTo investigate the diversity of butane-oxidizing bacteria in soils contaminated by long-term light hydrocarbon microseepage and the influence of butane on the soil microbial community, a quantitative study and identification of butane-oxidizing bacteria (BOB) in soils at the Puguang gas field were performed by DNA-based stable isotope probing (DNA-SIP). For the first time, two phylotypes corresponding to the genera Giesbergeria and Ramlibacter were identified as being directly involved in butane oxidation, in addition to the well-known light hydrocarbon degrader Pseudomonas. Furthermore, bmoX genes were strongly labeled by 13C-butane, and their abundances in gas field soils increased by 43.14-, 17.39-, 21.74-, and 30.14-fold when incubated with butane for 6, 9, 12, and 14 days, respectively, indicating that these bmoX-harboring bacteria could use butane as the sole carbon and energy source and they play an important role in butane degradation. We also found that the addition of butane rapidly shaped the bacterial community and reduced the diversity of bmoX genes in the gas field soils. These findings improve our understanding of BOB in the gas field environment and reveal the potential for their applications in petroleum exploration and bioremediation.https://www.frontiersin.org/article/10.3389/fmicb.2018.01576/fullbutane-oxidizing bacteriaDNA-SIPreal-time quantitative PCRbmoX genelight hydrocarbon microseepage |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Yue Deng Chunping Deng Jinshui Yang Baozhen Li Entao Wang Hongli Yuan |
spellingShingle |
Yue Deng Chunping Deng Jinshui Yang Baozhen Li Entao Wang Hongli Yuan Novel Butane-Oxidizing Bacteria and Diversity of bmoX Genes in Puguang Gas Field Frontiers in Microbiology butane-oxidizing bacteria DNA-SIP real-time quantitative PCR bmoX gene light hydrocarbon microseepage |
author_facet |
Yue Deng Chunping Deng Jinshui Yang Baozhen Li Entao Wang Hongli Yuan |
author_sort |
Yue Deng |
title |
Novel Butane-Oxidizing Bacteria and Diversity of bmoX Genes in Puguang Gas Field |
title_short |
Novel Butane-Oxidizing Bacteria and Diversity of bmoX Genes in Puguang Gas Field |
title_full |
Novel Butane-Oxidizing Bacteria and Diversity of bmoX Genes in Puguang Gas Field |
title_fullStr |
Novel Butane-Oxidizing Bacteria and Diversity of bmoX Genes in Puguang Gas Field |
title_full_unstemmed |
Novel Butane-Oxidizing Bacteria and Diversity of bmoX Genes in Puguang Gas Field |
title_sort |
novel butane-oxidizing bacteria and diversity of bmox genes in puguang gas field |
publisher |
Frontiers Media S.A. |
series |
Frontiers in Microbiology |
issn |
1664-302X |
publishDate |
2018-07-01 |
description |
To investigate the diversity of butane-oxidizing bacteria in soils contaminated by long-term light hydrocarbon microseepage and the influence of butane on the soil microbial community, a quantitative study and identification of butane-oxidizing bacteria (BOB) in soils at the Puguang gas field were performed by DNA-based stable isotope probing (DNA-SIP). For the first time, two phylotypes corresponding to the genera Giesbergeria and Ramlibacter were identified as being directly involved in butane oxidation, in addition to the well-known light hydrocarbon degrader Pseudomonas. Furthermore, bmoX genes were strongly labeled by 13C-butane, and their abundances in gas field soils increased by 43.14-, 17.39-, 21.74-, and 30.14-fold when incubated with butane for 6, 9, 12, and 14 days, respectively, indicating that these bmoX-harboring bacteria could use butane as the sole carbon and energy source and they play an important role in butane degradation. We also found that the addition of butane rapidly shaped the bacterial community and reduced the diversity of bmoX genes in the gas field soils. These findings improve our understanding of BOB in the gas field environment and reveal the potential for their applications in petroleum exploration and bioremediation. |
topic |
butane-oxidizing bacteria DNA-SIP real-time quantitative PCR bmoX gene light hydrocarbon microseepage |
url |
https://www.frontiersin.org/article/10.3389/fmicb.2018.01576/full |
work_keys_str_mv |
AT yuedeng novelbutaneoxidizingbacteriaanddiversityofbmoxgenesinpuguanggasfield AT chunpingdeng novelbutaneoxidizingbacteriaanddiversityofbmoxgenesinpuguanggasfield AT jinshuiyang novelbutaneoxidizingbacteriaanddiversityofbmoxgenesinpuguanggasfield AT baozhenli novelbutaneoxidizingbacteriaanddiversityofbmoxgenesinpuguanggasfield AT entaowang novelbutaneoxidizingbacteriaanddiversityofbmoxgenesinpuguanggasfield AT hongliyuan novelbutaneoxidizingbacteriaanddiversityofbmoxgenesinpuguanggasfield |
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