Kinetics and Predicted Structure of a Novel Xylose Reductase from Chaetomium thermophilum

While in search of an enzyme for the conversion of xylose to xylitol at elevated temperatures, a xylose reductase (XR) gene was identified in the genome of the thermophilic fungus Chaetomium thermophilum. The gene was heterologously expressed in Escherichia coli as a His6-tagged fusion protein and c...

Full description

Bibliographic Details
Main Authors: Julian Quehenberger, Tom Reichenbach, Niklas Baumann, Lukas Rettenbacher, Christina Divne, Oliver Spadiut
Format: Article
Language:English
Published: MDPI AG 2019-01-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:http://www.mdpi.com/1422-0067/20/1/185
id doaj-433771f9a2934495b49edae02829f44d
record_format Article
spelling doaj-433771f9a2934495b49edae02829f44d2020-11-25T00:46:11ZengMDPI AGInternational Journal of Molecular Sciences1422-00672019-01-0120118510.3390/ijms20010185ijms20010185Kinetics and Predicted Structure of a Novel Xylose Reductase from Chaetomium thermophilumJulian Quehenberger0Tom Reichenbach1Niklas Baumann2Lukas Rettenbacher3Christina Divne4Oliver Spadiut5Research Division Biochemical Engineering, Institute of Chemical, Environmental and Bioscience Engineering, Faculty of Technical Chemistry, TU Wien, 1060 Vienna, AustriaKTH School of Engineering Sciences in Chemistry, Biotechnology and Health, SE-100 44 Stockholm, SwedenResearch Division Biochemical Engineering, Institute of Chemical, Environmental and Bioscience Engineering, Faculty of Technical Chemistry, TU Wien, 1060 Vienna, AustriaResearch Division Biochemical Engineering, Institute of Chemical, Environmental and Bioscience Engineering, Faculty of Technical Chemistry, TU Wien, 1060 Vienna, AustriaKTH School of Engineering Sciences in Chemistry, Biotechnology and Health, SE-100 44 Stockholm, SwedenResearch Division Biochemical Engineering, Institute of Chemical, Environmental and Bioscience Engineering, Faculty of Technical Chemistry, TU Wien, 1060 Vienna, AustriaWhile in search of an enzyme for the conversion of xylose to xylitol at elevated temperatures, a xylose reductase (XR) gene was identified in the genome of the thermophilic fungus Chaetomium thermophilum. The gene was heterologously expressed in Escherichia coli as a His6-tagged fusion protein and characterized for function and structure. The enzyme exhibits dual cofactor specificity for NADPH and NADH and prefers D-xylose over other pentoses and investigated hexoses. A homology model based on a XR from Candida tenuis was generated and the architecture of the cofactor binding site was investigated in detail. Despite the outstanding thermophilicity of its host the enzyme is, however, not thermostable.http://www.mdpi.com/1422-0067/20/1/185xylose reductaseChaetomium thermophilumkineticsstructurehomology modelcofactor bindingstability
collection DOAJ
language English
format Article
sources DOAJ
author Julian Quehenberger
Tom Reichenbach
Niklas Baumann
Lukas Rettenbacher
Christina Divne
Oliver Spadiut
spellingShingle Julian Quehenberger
Tom Reichenbach
Niklas Baumann
Lukas Rettenbacher
Christina Divne
Oliver Spadiut
Kinetics and Predicted Structure of a Novel Xylose Reductase from Chaetomium thermophilum
International Journal of Molecular Sciences
xylose reductase
Chaetomium thermophilum
kinetics
structure
homology model
cofactor binding
stability
author_facet Julian Quehenberger
Tom Reichenbach
Niklas Baumann
Lukas Rettenbacher
Christina Divne
Oliver Spadiut
author_sort Julian Quehenberger
title Kinetics and Predicted Structure of a Novel Xylose Reductase from Chaetomium thermophilum
title_short Kinetics and Predicted Structure of a Novel Xylose Reductase from Chaetomium thermophilum
title_full Kinetics and Predicted Structure of a Novel Xylose Reductase from Chaetomium thermophilum
title_fullStr Kinetics and Predicted Structure of a Novel Xylose Reductase from Chaetomium thermophilum
title_full_unstemmed Kinetics and Predicted Structure of a Novel Xylose Reductase from Chaetomium thermophilum
title_sort kinetics and predicted structure of a novel xylose reductase from chaetomium thermophilum
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1422-0067
publishDate 2019-01-01
description While in search of an enzyme for the conversion of xylose to xylitol at elevated temperatures, a xylose reductase (XR) gene was identified in the genome of the thermophilic fungus Chaetomium thermophilum. The gene was heterologously expressed in Escherichia coli as a His6-tagged fusion protein and characterized for function and structure. The enzyme exhibits dual cofactor specificity for NADPH and NADH and prefers D-xylose over other pentoses and investigated hexoses. A homology model based on a XR from Candida tenuis was generated and the architecture of the cofactor binding site was investigated in detail. Despite the outstanding thermophilicity of its host the enzyme is, however, not thermostable.
topic xylose reductase
Chaetomium thermophilum
kinetics
structure
homology model
cofactor binding
stability
url http://www.mdpi.com/1422-0067/20/1/185
work_keys_str_mv AT julianquehenberger kineticsandpredictedstructureofanovelxylosereductasefromchaetomiumthermophilum
AT tomreichenbach kineticsandpredictedstructureofanovelxylosereductasefromchaetomiumthermophilum
AT niklasbaumann kineticsandpredictedstructureofanovelxylosereductasefromchaetomiumthermophilum
AT lukasrettenbacher kineticsandpredictedstructureofanovelxylosereductasefromchaetomiumthermophilum
AT christinadivne kineticsandpredictedstructureofanovelxylosereductasefromchaetomiumthermophilum
AT oliverspadiut kineticsandpredictedstructureofanovelxylosereductasefromchaetomiumthermophilum
_version_ 1725266287559442432