Decomposed Temporal Complexity Analysis of Neural Oscillations and Machine Learning Applied to Alzheimer’s Disease Diagnosis

Despite growing evidence of aberrant neuronal complexity in Alzheimer’s disease (AD), it remains unclear how this variation arises. Neural oscillations reportedly comprise different functions depending on their own properties. Therefore, in this study, we investigated details of the complexity of ne...

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Main Authors: Naoki Furutani, Yuta Nariya, Tetsuya Takahashi, Sarah Noto, Albert C. Yang, Tetsu Hirosawa, Masafumi Kameya, Yoshio Minabe, Mitsuru Kikuchi
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-09-01
Series:Frontiers in Psychiatry
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fpsyt.2020.531801/full
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spelling doaj-41b1dba0fb3842839b5ce55f18ba05f12020-11-25T03:20:44ZengFrontiers Media S.A.Frontiers in Psychiatry1664-06402020-09-011110.3389/fpsyt.2020.531801531801Decomposed Temporal Complexity Analysis of Neural Oscillations and Machine Learning Applied to Alzheimer’s Disease DiagnosisNaoki Furutani0Yuta Nariya1Tetsuya Takahashi2Sarah Noto3Albert C. Yang4Albert C. Yang5Tetsu Hirosawa6Masafumi Kameya7Yoshio Minabe8Mitsuru Kikuchi9Mitsuru Kikuchi10Department of Psychiatry and Neurobiology, Graduate School of Medical Science, Kanazawa University, Kanazawa, JapanFaculty of Medicine, The University of Tokyo, Tokyo, JapanResearch Center for Child Mental Development, Kanazawa University, Kanazawa, JapanFaculty of Nursing, National College of Nursing, Tokyo, JapanDivision of Interdisciplinary Medicine and Biotechnology, Beth Israel Deaconess Medical Center/Harvard Medical School, Boston, MA, United StatesInstitute of Brain Science, National Yang-Ming University, Taipei, TaiwanDepartment of Psychiatry and Neurobiology, Graduate School of Medical Science, Kanazawa University, Kanazawa, JapanDepartment of Psychiatry and Neurobiology, Graduate School of Medical Science, Kanazawa University, Kanazawa, JapanDepartment of Psychiatry and Neurobiology, Graduate School of Medical Science, Kanazawa University, Kanazawa, JapanDepartment of Psychiatry and Neurobiology, Graduate School of Medical Science, Kanazawa University, Kanazawa, JapanResearch Center for Child Mental Development, Kanazawa University, Kanazawa, JapanDespite growing evidence of aberrant neuronal complexity in Alzheimer’s disease (AD), it remains unclear how this variation arises. Neural oscillations reportedly comprise different functions depending on their own properties. Therefore, in this study, we investigated details of the complexity of neural oscillations by decomposing the oscillations into frequency, amplitude, and phase for AD patients. We applied resting-state magnetoencephalography (MEG) to 17 AD patients and 21 healthy control subjects. We first decomposed the source time series of the MEG signal into five intrinsic mode functions using ensemble empirical mode decomposition. We then analyzed the temporal complexities of these time series using multiscale entropy. Results demonstrated that AD patients had lower complexity on short time scales and higher complexity on long time scales in the alpha band in temporal regions of the brain. We evaluated the alpha band complexity further by decomposing it into amplitude and phase using Hilbert spectral analysis. Consequently, we found lower amplitude complexity and higher phase complexity in AD patients. Correlation analyses between spectral complexity and decomposed complexities revealed scale-dependency. Specifically, amplitude complexity was positively correlated with spectral complexity on short time scales, whereas phase complexity was positively correlated with spectral complexity on long time scales. Regarding the relevance of cognitive function to the complexity measures, the phase complexity on the long time scale was found to be correlated significantly with the Mini-Mental State Examination score. Additionally, we examined the diagnostic utility of the complexity characteristics using machine learning (ML) methods. We prepared a feature pool using multiple sparse autoencoders (SAEs), chose some discriminating features, and applied them to a support vector machine (SVM). Compared to the simple SVM and the SVM after feature selection (FS + SVM), the SVM with multiple SAEs (SAE + FS + SVM) had improved diagnostic accuracy. Through this study, we 1) advanced the understanding of neuronal complexity in AD patients using decomposed temporal complexity analysis and 2) demonstrated the effectiveness of combining ML methods with information about signal complexity for the diagnosis of AD.https://www.frontiersin.org/article/10.3389/fpsyt.2020.531801/fullalpha oscillationAlzheimer’s disease (AD)amplitude complexityensemble empirical mode decomposition (EEMD)magnetoencephalography (MEG)multiscale entropy (MSE)
collection DOAJ
language English
format Article
sources DOAJ
author Naoki Furutani
Yuta Nariya
Tetsuya Takahashi
Sarah Noto
Albert C. Yang
Albert C. Yang
Tetsu Hirosawa
Masafumi Kameya
Yoshio Minabe
Mitsuru Kikuchi
Mitsuru Kikuchi
spellingShingle Naoki Furutani
Yuta Nariya
Tetsuya Takahashi
Sarah Noto
Albert C. Yang
Albert C. Yang
Tetsu Hirosawa
Masafumi Kameya
Yoshio Minabe
Mitsuru Kikuchi
Mitsuru Kikuchi
Decomposed Temporal Complexity Analysis of Neural Oscillations and Machine Learning Applied to Alzheimer’s Disease Diagnosis
Frontiers in Psychiatry
alpha oscillation
Alzheimer’s disease (AD)
amplitude complexity
ensemble empirical mode decomposition (EEMD)
magnetoencephalography (MEG)
multiscale entropy (MSE)
author_facet Naoki Furutani
Yuta Nariya
Tetsuya Takahashi
Sarah Noto
Albert C. Yang
Albert C. Yang
Tetsu Hirosawa
Masafumi Kameya
Yoshio Minabe
Mitsuru Kikuchi
Mitsuru Kikuchi
author_sort Naoki Furutani
title Decomposed Temporal Complexity Analysis of Neural Oscillations and Machine Learning Applied to Alzheimer’s Disease Diagnosis
title_short Decomposed Temporal Complexity Analysis of Neural Oscillations and Machine Learning Applied to Alzheimer’s Disease Diagnosis
title_full Decomposed Temporal Complexity Analysis of Neural Oscillations and Machine Learning Applied to Alzheimer’s Disease Diagnosis
title_fullStr Decomposed Temporal Complexity Analysis of Neural Oscillations and Machine Learning Applied to Alzheimer’s Disease Diagnosis
title_full_unstemmed Decomposed Temporal Complexity Analysis of Neural Oscillations and Machine Learning Applied to Alzheimer’s Disease Diagnosis
title_sort decomposed temporal complexity analysis of neural oscillations and machine learning applied to alzheimer’s disease diagnosis
publisher Frontiers Media S.A.
series Frontiers in Psychiatry
issn 1664-0640
publishDate 2020-09-01
description Despite growing evidence of aberrant neuronal complexity in Alzheimer’s disease (AD), it remains unclear how this variation arises. Neural oscillations reportedly comprise different functions depending on their own properties. Therefore, in this study, we investigated details of the complexity of neural oscillations by decomposing the oscillations into frequency, amplitude, and phase for AD patients. We applied resting-state magnetoencephalography (MEG) to 17 AD patients and 21 healthy control subjects. We first decomposed the source time series of the MEG signal into five intrinsic mode functions using ensemble empirical mode decomposition. We then analyzed the temporal complexities of these time series using multiscale entropy. Results demonstrated that AD patients had lower complexity on short time scales and higher complexity on long time scales in the alpha band in temporal regions of the brain. We evaluated the alpha band complexity further by decomposing it into amplitude and phase using Hilbert spectral analysis. Consequently, we found lower amplitude complexity and higher phase complexity in AD patients. Correlation analyses between spectral complexity and decomposed complexities revealed scale-dependency. Specifically, amplitude complexity was positively correlated with spectral complexity on short time scales, whereas phase complexity was positively correlated with spectral complexity on long time scales. Regarding the relevance of cognitive function to the complexity measures, the phase complexity on the long time scale was found to be correlated significantly with the Mini-Mental State Examination score. Additionally, we examined the diagnostic utility of the complexity characteristics using machine learning (ML) methods. We prepared a feature pool using multiple sparse autoencoders (SAEs), chose some discriminating features, and applied them to a support vector machine (SVM). Compared to the simple SVM and the SVM after feature selection (FS + SVM), the SVM with multiple SAEs (SAE + FS + SVM) had improved diagnostic accuracy. Through this study, we 1) advanced the understanding of neuronal complexity in AD patients using decomposed temporal complexity analysis and 2) demonstrated the effectiveness of combining ML methods with information about signal complexity for the diagnosis of AD.
topic alpha oscillation
Alzheimer’s disease (AD)
amplitude complexity
ensemble empirical mode decomposition (EEMD)
magnetoencephalography (MEG)
multiscale entropy (MSE)
url https://www.frontiersin.org/article/10.3389/fpsyt.2020.531801/full
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