Comparative study of experimental and computational procedures for the calculation of molecular lipophilicity
Background – The lipophilicity is one of the physicochemical properties that most influences the ability of a molecule to move through biological compartments. The octanol/water partition coefficient (log P) can give us an estimation of the drugs’ absorption in the organism. The existence of indirec...
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doaj-4114e125ae9f41b0b255b405fbe5b2702020-11-25T00:43:22ZengEscola Superior de Tecnologia da Saúde de LisboaSaúde & Tecnologia1646-97042015-11-0105293410.25758/s&t.v0i5.344354Comparative study of experimental and computational procedures for the calculation of molecular lipophilicityGonçalo Clemente0Técnico de Medicina Nuclear especializado em Química Inorgânica BiomédicaBackground – The lipophilicity is one of the physicochemical properties that most influences the ability of a molecule to move through biological compartments. The octanol/water partition coefficient (log P) can give us an estimation of the drugs’ absorption in the organism. The existence of indirect methods for a quick calculation of log P may have great importance in the analysis of lists of compounds with potential pharmacological action, reducing them to those who are expected to have a better biological behavior. Objectives – The purpose of this work is to present a RP-HPLC chromatographic method developed for indirect determination of the molecular lipophilicity and evaluate the performance of different computational programs that calculate this same parameter. Methods – For this study 25 compounds were selected, then the log P of each one was evaluated by RP-HPLC and finally the results were compared with those calculated by seven computational programs. Results – The tested RP-HPLC method proved to be advantageous in comparison to the conventional shake flask technique. The indirect calculation program that provides results closest to the experimentally obtained was ALOGPS© 2.1. Conclusions – The ideal choice for determining the lipophilicity of compounds whose log P is estimated to be between 0 and 6 is the experimental indirect method by RP-HPLC, especially regarding the quickness and simplicity of this procedure. For the computational methods it was concluded that none of the programs, including ALOGPS© 2.1, proved to be effective in the evaluation of isomers. For this kind of compounds it will be always necessary the shake flask or the RP-HPLC technique.https://web.estesl.ipl.pt/ojs/index.php/ST/article/view/344lipofilia, log P, RP-HPLC, cálculo computacional |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Gonçalo Clemente |
spellingShingle |
Gonçalo Clemente Comparative study of experimental and computational procedures for the calculation of molecular lipophilicity Saúde & Tecnologia lipofilia, log P, RP-HPLC, cálculo computacional |
author_facet |
Gonçalo Clemente |
author_sort |
Gonçalo Clemente |
title |
Comparative study of experimental and computational procedures for the calculation of molecular lipophilicity |
title_short |
Comparative study of experimental and computational procedures for the calculation of molecular lipophilicity |
title_full |
Comparative study of experimental and computational procedures for the calculation of molecular lipophilicity |
title_fullStr |
Comparative study of experimental and computational procedures for the calculation of molecular lipophilicity |
title_full_unstemmed |
Comparative study of experimental and computational procedures for the calculation of molecular lipophilicity |
title_sort |
comparative study of experimental and computational procedures for the calculation of molecular lipophilicity |
publisher |
Escola Superior de Tecnologia da Saúde de Lisboa |
series |
Saúde & Tecnologia |
issn |
1646-9704 |
publishDate |
2015-11-01 |
description |
Background – The lipophilicity is one of the physicochemical properties that most influences the ability of a molecule to move through biological compartments. The octanol/water partition coefficient (log P) can give us an estimation of the drugs’ absorption in the organism. The existence of indirect methods for a quick calculation of log P may have great importance in the analysis of lists of compounds with potential pharmacological action, reducing them to those who are expected to have a better biological behavior. Objectives – The purpose of this work is to present a RP-HPLC chromatographic method developed for indirect determination of the molecular lipophilicity and evaluate the performance of different computational programs that calculate this same parameter. Methods – For this study 25 compounds were selected, then the log P of each one was evaluated by RP-HPLC and finally the results were compared with those calculated by seven computational programs. Results – The tested RP-HPLC method proved to be advantageous in comparison to the conventional shake flask technique. The indirect calculation program that provides results closest to the experimentally obtained was ALOGPS© 2.1. Conclusions – The ideal choice for determining the lipophilicity of compounds whose log P is estimated to be between 0 and 6 is the experimental indirect method by RP-HPLC, especially regarding the quickness and simplicity of this procedure. For the computational methods it was concluded that none of the programs, including ALOGPS© 2.1, proved to be effective in the evaluation of isomers. For this kind of compounds it will be always necessary the shake flask or the RP-HPLC technique. |
topic |
lipofilia, log P, RP-HPLC, cálculo computacional |
url |
https://web.estesl.ipl.pt/ojs/index.php/ST/article/view/344 |
work_keys_str_mv |
AT goncaloclemente comparativestudyofexperimentalandcomputationalproceduresforthecalculationofmolecularlipophilicity |
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1725278817225801728 |