Spark-based parallel calculation of 3D fourier shell correlation for macromolecule structure local resolution estimation

Spark-based parallel calculation of 3D fourier shell correlation for macromolecule structure local resolution estimation

Abstract Background Resolution estimation is the main evaluation criteria for the reconstruction of macromolecular 3D structure in the field of cryoelectron microscopy (cryo-EM). At present, there are many methods to evaluate the 3D resolution for reconstructed macromolecular structures from Single...

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Bibliographic Details
Main Authors: Yongchun Lü, Xiangrui Zeng, Xinhui Tian, Xiao Shi, Hui Wang, Xiaohui Zheng, Xiaodong Liu, Xiaofang Zhao, Xin Gao, Min Xu
Format: Article
Language:English
Published: BMC 2020-09-01
Series:BMC Bioinformatics
Subjects:
3D local Fourier shell correlation
3D local resolution map
Key-value data
Spark
3D array partition
Online Access:http://link.springer.com/article/10.1186/s12859-020-03680-6

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