Mechanism of activation at the selectivity filter of the KcsA K+ channel
Potassium channels are opened by ligands and/or membrane potential. In voltage-gated K+ channels and the prokaryotic KcsA channel, conduction is believed to result from opening of an intracellular constriction that prevents ion entry into the pore. On the other hand, numerous ligand-gated K+ channel...
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doaj-401d53a3f00a424abd5f848f513248582021-05-05T13:51:47ZengeLife Sciences Publications LtdeLife2050-084X2017-10-01610.7554/eLife.25844Mechanism of activation at the selectivity filter of the KcsA K+ channelFlorian T Heer0David J Posson1https://orcid.org/0000-0002-6491-8238Wojciech Wojtas-Niziurski2Crina M Nimigean3https://orcid.org/0000-0002-6254-4447Simon Bernèche4https://orcid.org/0000-0002-6274-4094SIB Swiss Institute of Bioinformatics, University of Basel, Basel, Switzerland; Biozentrum, University of Basel, Basel, SwitzerlandDepartment of Anesthesiology, Weill Cornell Medical College, New York, United States; Department of Physiology and Biophysics, Weill Cornell Medical College, New York, United StatesSIB Swiss Institute of Bioinformatics, University of Basel, Basel, Switzerland; Biozentrum, University of Basel, Basel, SwitzerlandDepartment of Anesthesiology, Weill Cornell Medical College, New York, United States; Department of Physiology and Biophysics, Weill Cornell Medical College, New York, United States; Department of Biochemistry, Weill Cornell Medical College, New York, United StatesSIB Swiss Institute of Bioinformatics, University of Basel, Basel, Switzerland; Biozentrum, University of Basel, Basel, SwitzerlandPotassium channels are opened by ligands and/or membrane potential. In voltage-gated K+ channels and the prokaryotic KcsA channel, conduction is believed to result from opening of an intracellular constriction that prevents ion entry into the pore. On the other hand, numerous ligand-gated K+ channels lack such gate, suggesting that they may be activated by a change within the selectivity filter, a narrow region at the extracellular side of the pore. Using molecular dynamics simulations and electrophysiology measurements, we show that ligand-induced conformational changes in the KcsA channel removes steric restraints at the selectivity filter, thus resulting in structural fluctuations, reduced K+ affinity, and increased ion permeation. Such activation of the selectivity filter may be a universal gating mechanism within K+ channels. The occlusion of the pore at the level of the intracellular gate appears to be secondary.https://elifesciences.org/articles/25844ion channelconductancegatingpH gatedallosterymolecular dynamics |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Florian T Heer David J Posson Wojciech Wojtas-Niziurski Crina M Nimigean Simon Bernèche |
spellingShingle |
Florian T Heer David J Posson Wojciech Wojtas-Niziurski Crina M Nimigean Simon Bernèche Mechanism of activation at the selectivity filter of the KcsA K+ channel eLife ion channel conductance gating pH gated allostery molecular dynamics |
author_facet |
Florian T Heer David J Posson Wojciech Wojtas-Niziurski Crina M Nimigean Simon Bernèche |
author_sort |
Florian T Heer |
title |
Mechanism of activation at the selectivity filter of the KcsA K+ channel |
title_short |
Mechanism of activation at the selectivity filter of the KcsA K+ channel |
title_full |
Mechanism of activation at the selectivity filter of the KcsA K+ channel |
title_fullStr |
Mechanism of activation at the selectivity filter of the KcsA K+ channel |
title_full_unstemmed |
Mechanism of activation at the selectivity filter of the KcsA K+ channel |
title_sort |
mechanism of activation at the selectivity filter of the kcsa k+ channel |
publisher |
eLife Sciences Publications Ltd |
series |
eLife |
issn |
2050-084X |
publishDate |
2017-10-01 |
description |
Potassium channels are opened by ligands and/or membrane potential. In voltage-gated K+ channels and the prokaryotic KcsA channel, conduction is believed to result from opening of an intracellular constriction that prevents ion entry into the pore. On the other hand, numerous ligand-gated K+ channels lack such gate, suggesting that they may be activated by a change within the selectivity filter, a narrow region at the extracellular side of the pore. Using molecular dynamics simulations and electrophysiology measurements, we show that ligand-induced conformational changes in the KcsA channel removes steric restraints at the selectivity filter, thus resulting in structural fluctuations, reduced K+ affinity, and increased ion permeation. Such activation of the selectivity filter may be a universal gating mechanism within K+ channels. The occlusion of the pore at the level of the intracellular gate appears to be secondary. |
topic |
ion channel conductance gating pH gated allostery molecular dynamics |
url |
https://elifesciences.org/articles/25844 |
work_keys_str_mv |
AT floriantheer mechanismofactivationattheselectivityfilterofthekcsakchannel AT davidjposson mechanismofactivationattheselectivityfilterofthekcsakchannel AT wojciechwojtasniziurski mechanismofactivationattheselectivityfilterofthekcsakchannel AT crinamnimigean mechanismofactivationattheselectivityfilterofthekcsakchannel AT simonberneche mechanismofactivationattheselectivityfilterofthekcsakchannel |
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1721460584808972288 |