Genomic Breeding for Diameter Growth and Tolerance to Leptocybe Gall Wasp and Botryosphaeria/Teratosphaeria Fungal Disease Complex in Eucalyptus grandis

Eucalyptus grandis is one of the most important species for hardwood plantation forestry around the world. At present, its commercial deployment is in decline because of pests and pathogens such as Leptocybe invasa gall wasp (Lepto), and often co-occurring fungal stem diseases such as Botryosphaeria...

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Main Authors: Makobatjatji M. Mphahlele, Fikret Isik, Gary R. Hodge, Alexander A. Myburg
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-02-01
Series:Frontiers in Plant Science
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fpls.2021.638969/full
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spelling doaj-3fcd4b885eda4180962fb9959270fd2b2021-02-26T06:28:47ZengFrontiers Media S.A.Frontiers in Plant Science1664-462X2021-02-011210.3389/fpls.2021.638969638969Genomic Breeding for Diameter Growth and Tolerance to Leptocybe Gall Wasp and Botryosphaeria/Teratosphaeria Fungal Disease Complex in Eucalyptus grandisMakobatjatji M. Mphahlele0Makobatjatji M. Mphahlele1Fikret Isik2Gary R. Hodge3Gary R. Hodge4Alexander A. Myburg5Mondi Forests, Research and Development Department, Trahar Technology Centre – TTC, Hilton, South AfricaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria, South AfricaDepartment of Forestry and Environmental Resources, North Carolina State University, Raleigh, NC, United StatesDepartment of Forestry and Environmental Resources, North Carolina State University, Raleigh, NC, United StatesCamcore, North Carolina State University, Raleigh, NC, United StatesDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria, South AfricaEucalyptus grandis is one of the most important species for hardwood plantation forestry around the world. At present, its commercial deployment is in decline because of pests and pathogens such as Leptocybe invasa gall wasp (Lepto), and often co-occurring fungal stem diseases such as Botryosphaeria dothidea and Teratosphaeria zuluensis (BotryoTera). This study analyzed Lepto, BotryoTera, and stem diameter growth in an E. grandis multi-environmental, genetic trial. The study was established in three subtropical environments. Diameter growth and BotryoTera incidence scores were assessed on 3,334 trees, and Lepto incidence was assessed on 4,463 trees from 95 half-sib families. Using the Eucalyptus EUChip60K SNP chip, a subset of 964 trees from 93 half-sib families were genotyped with 14,347 informative SNP markers. We employed single-step genomic BLUP (ssGBLUP) to estimate genetic parameters in the genetic trial. Diameter and Lepto tolerance showed a positive genetic correlation (0.78), while BotryoTera tolerance had a negative genetic correlation with diameter growth (−0.38). The expected genetic gains for diameter growth and Lepto and BotryoTera tolerance were 12.4, 10, and −3.4%, respectively. We propose a genomic selection breeding strategy for E. grandis that addresses some of the present population structure problems.https://www.frontiersin.org/articles/10.3389/fpls.2021.638969/fullssGBLUPgenetic correlationEucalyptus grandisLeptocybe invasaBotryosphaeria dothideaTeratosphaeria zuluensis
collection DOAJ
language English
format Article
sources DOAJ
author Makobatjatji M. Mphahlele
Makobatjatji M. Mphahlele
Fikret Isik
Gary R. Hodge
Gary R. Hodge
Alexander A. Myburg
spellingShingle Makobatjatji M. Mphahlele
Makobatjatji M. Mphahlele
Fikret Isik
Gary R. Hodge
Gary R. Hodge
Alexander A. Myburg
Genomic Breeding for Diameter Growth and Tolerance to Leptocybe Gall Wasp and Botryosphaeria/Teratosphaeria Fungal Disease Complex in Eucalyptus grandis
Frontiers in Plant Science
ssGBLUP
genetic correlation
Eucalyptus grandis
Leptocybe invasa
Botryosphaeria dothidea
Teratosphaeria zuluensis
author_facet Makobatjatji M. Mphahlele
Makobatjatji M. Mphahlele
Fikret Isik
Gary R. Hodge
Gary R. Hodge
Alexander A. Myburg
author_sort Makobatjatji M. Mphahlele
title Genomic Breeding for Diameter Growth and Tolerance to Leptocybe Gall Wasp and Botryosphaeria/Teratosphaeria Fungal Disease Complex in Eucalyptus grandis
title_short Genomic Breeding for Diameter Growth and Tolerance to Leptocybe Gall Wasp and Botryosphaeria/Teratosphaeria Fungal Disease Complex in Eucalyptus grandis
title_full Genomic Breeding for Diameter Growth and Tolerance to Leptocybe Gall Wasp and Botryosphaeria/Teratosphaeria Fungal Disease Complex in Eucalyptus grandis
title_fullStr Genomic Breeding for Diameter Growth and Tolerance to Leptocybe Gall Wasp and Botryosphaeria/Teratosphaeria Fungal Disease Complex in Eucalyptus grandis
title_full_unstemmed Genomic Breeding for Diameter Growth and Tolerance to Leptocybe Gall Wasp and Botryosphaeria/Teratosphaeria Fungal Disease Complex in Eucalyptus grandis
title_sort genomic breeding for diameter growth and tolerance to leptocybe gall wasp and botryosphaeria/teratosphaeria fungal disease complex in eucalyptus grandis
publisher Frontiers Media S.A.
series Frontiers in Plant Science
issn 1664-462X
publishDate 2021-02-01
description Eucalyptus grandis is one of the most important species for hardwood plantation forestry around the world. At present, its commercial deployment is in decline because of pests and pathogens such as Leptocybe invasa gall wasp (Lepto), and often co-occurring fungal stem diseases such as Botryosphaeria dothidea and Teratosphaeria zuluensis (BotryoTera). This study analyzed Lepto, BotryoTera, and stem diameter growth in an E. grandis multi-environmental, genetic trial. The study was established in three subtropical environments. Diameter growth and BotryoTera incidence scores were assessed on 3,334 trees, and Lepto incidence was assessed on 4,463 trees from 95 half-sib families. Using the Eucalyptus EUChip60K SNP chip, a subset of 964 trees from 93 half-sib families were genotyped with 14,347 informative SNP markers. We employed single-step genomic BLUP (ssGBLUP) to estimate genetic parameters in the genetic trial. Diameter and Lepto tolerance showed a positive genetic correlation (0.78), while BotryoTera tolerance had a negative genetic correlation with diameter growth (−0.38). The expected genetic gains for diameter growth and Lepto and BotryoTera tolerance were 12.4, 10, and −3.4%, respectively. We propose a genomic selection breeding strategy for E. grandis that addresses some of the present population structure problems.
topic ssGBLUP
genetic correlation
Eucalyptus grandis
Leptocybe invasa
Botryosphaeria dothidea
Teratosphaeria zuluensis
url https://www.frontiersin.org/articles/10.3389/fpls.2021.638969/full
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