Using DNA Barcoding and Standardized Sampling to Compare Geographic and Habitat Differentiation of Crustaceans: A Hawaiian Islands Example

Recently, the Census of Marine Life has explored methods to assess coral reef diversity by combining standardized sampling (to permit comparison across sites) with molecular techniques (to make rapid counts of species possible). To date, this approach has been applied across geographically broad sca...

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Main Authors: M. Julian Caley, Nancy Knowlton, Laetitia Plaisance, Russell Brainard
Format: Article
Language:English
Published: MDPI AG 2011-09-01
Series:Diversity
Subjects:
Online Access:http://www.mdpi.com/1424-2818/3/4/581/
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spelling doaj-3c2c98afb3ed4b87a81ded403bf624362020-11-24T23:44:06ZengMDPI AGDiversity1424-28182011-09-013458159110.3390/d3040581Using DNA Barcoding and Standardized Sampling to Compare Geographic and Habitat Differentiation of Crustaceans: A Hawaiian Islands ExampleM. Julian CaleyNancy KnowltonLaetitia PlaisanceRussell BrainardRecently, the Census of Marine Life has explored methods to assess coral reef diversity by combining standardized sampling (to permit comparison across sites) with molecular techniques (to make rapid counts of species possible). To date, this approach has been applied across geographically broad scales (seven sites spanning the Indian, Pacific and Atlantic Oceans), focusing on similar habitats at all sites (10–12 m forereef). Here we examine crustacean spatial diversity patterns for a single atoll, comparing results for four sites (comprising forereef, backreef, and lagoon habitats) at French Frigate Shoals (FFS), Northwestern Hawaiian Islands, Hawaii, USA, within the Papahanaumokuakea Marine National Monument. The Bray-Curtis index of similarity across these habitats at FFS was the same or greater than the similarity between similar habitats on Heron Island and Lizard Island in the Great Barrier Reef and much greater than similarity between more widely separated localities in the Indo-Pacific Ocean (e.g., Ningaloo, Moorea, French Polynesia or the Line Islands). These results imply that, at least for shallow reefs, sampling multiple locations versus sampling multiple habitats within a site maximizes the rate at which we can converge on the best global estimate of coral reef biodiversity.http://www.mdpi.com/1424-2818/3/4/581/Census of Marine LifeCReefsNorthwestern Hawaiian Islandscoral reefsbiodiversityARMSspecies richnessmacroecologybiogeography
collection DOAJ
language English
format Article
sources DOAJ
author M. Julian Caley
Nancy Knowlton
Laetitia Plaisance
Russell Brainard
spellingShingle M. Julian Caley
Nancy Knowlton
Laetitia Plaisance
Russell Brainard
Using DNA Barcoding and Standardized Sampling to Compare Geographic and Habitat Differentiation of Crustaceans: A Hawaiian Islands Example
Diversity
Census of Marine Life
CReefs
Northwestern Hawaiian Islands
coral reefs
biodiversity
ARMS
species richness
macroecology
biogeography
author_facet M. Julian Caley
Nancy Knowlton
Laetitia Plaisance
Russell Brainard
author_sort M. Julian Caley
title Using DNA Barcoding and Standardized Sampling to Compare Geographic and Habitat Differentiation of Crustaceans: A Hawaiian Islands Example
title_short Using DNA Barcoding and Standardized Sampling to Compare Geographic and Habitat Differentiation of Crustaceans: A Hawaiian Islands Example
title_full Using DNA Barcoding and Standardized Sampling to Compare Geographic and Habitat Differentiation of Crustaceans: A Hawaiian Islands Example
title_fullStr Using DNA Barcoding and Standardized Sampling to Compare Geographic and Habitat Differentiation of Crustaceans: A Hawaiian Islands Example
title_full_unstemmed Using DNA Barcoding and Standardized Sampling to Compare Geographic and Habitat Differentiation of Crustaceans: A Hawaiian Islands Example
title_sort using dna barcoding and standardized sampling to compare geographic and habitat differentiation of crustaceans: a hawaiian islands example
publisher MDPI AG
series Diversity
issn 1424-2818
publishDate 2011-09-01
description Recently, the Census of Marine Life has explored methods to assess coral reef diversity by combining standardized sampling (to permit comparison across sites) with molecular techniques (to make rapid counts of species possible). To date, this approach has been applied across geographically broad scales (seven sites spanning the Indian, Pacific and Atlantic Oceans), focusing on similar habitats at all sites (10–12 m forereef). Here we examine crustacean spatial diversity patterns for a single atoll, comparing results for four sites (comprising forereef, backreef, and lagoon habitats) at French Frigate Shoals (FFS), Northwestern Hawaiian Islands, Hawaii, USA, within the Papahanaumokuakea Marine National Monument. The Bray-Curtis index of similarity across these habitats at FFS was the same or greater than the similarity between similar habitats on Heron Island and Lizard Island in the Great Barrier Reef and much greater than similarity between more widely separated localities in the Indo-Pacific Ocean (e.g., Ningaloo, Moorea, French Polynesia or the Line Islands). These results imply that, at least for shallow reefs, sampling multiple locations versus sampling multiple habitats within a site maximizes the rate at which we can converge on the best global estimate of coral reef biodiversity.
topic Census of Marine Life
CReefs
Northwestern Hawaiian Islands
coral reefs
biodiversity
ARMS
species richness
macroecology
biogeography
url http://www.mdpi.com/1424-2818/3/4/581/
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