Assessing the Functional Limitations of Lipids and Fatty Acids for Diet Determination: The Importance of Tissue Type, Quantity, and Quality
Lipid and fatty acid (FA) analysis is commonly used to describe the trophic ecology of an increasing number of taxa. However, the applicability of these analyses is contingent upon the collection and storage of sufficient high quality tissue, the limitations of which are previously unexplored in ela...
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doaj-3befa581eaa14058b417ceba7b8077062020-11-25T01:35:50ZengFrontiers Media S.A.Frontiers in Marine Science2296-77452017-11-01410.3389/fmars.2017.00369303938Assessing the Functional Limitations of Lipids and Fatty Acids for Diet Determination: The Importance of Tissue Type, Quantity, and QualityLauren Meyer0Lauren Meyer1Heidi Pethybridge2Peter D. Nichols3Crystal Beckmann4Barry D. Bruce5Jonathan M. Werry6Charlie Huveneers7College of Science and Engineering, Flinders University, Bedford Park, SA, AustraliaCSIRO Oceans and Atmosphere, Hobart, TAS, AustraliaCSIRO Oceans and Atmosphere, Hobart, TAS, AustraliaCSIRO Oceans and Atmosphere, Hobart, TAS, AustraliaSARDI Aquatic Sciences, South Australian Research and Development Institute, West Beach, SA, AustraliaCSIRO Oceans and Atmosphere, Hobart, TAS, AustraliaGriffith Centre for Coastal Management, Griffith University, Gold Coast, QLD, AustraliaCollege of Science and Engineering, Flinders University, Bedford Park, SA, AustraliaLipid and fatty acid (FA) analysis is commonly used to describe the trophic ecology of an increasing number of taxa. However, the applicability of these analyses is contingent upon the collection and storage of sufficient high quality tissue, the limitations of which are previously unexplored in elasmobranchs. Using samples from 110 white sharks, Carcharodon carcharias, collected throughout Australia, we investigated the importance of tissue type, sample quantity, and quality for reliable lipid class and FA analysis. We determined that muscle and sub-dermal tissue contain distinct lipid class and FA profiles, and were not directly comparable. Muscle samples as small as 12 mg dry weight (49 mg wet weight), provided reliable and consistent FA profiles, while sub-dermal tissue samples of 40 mg dry weight (186 mg wet weight) or greater were required to yield consistent profiles. This validates the suitability of minimally invasive sampling methods such as punch biopsies. The integrity of FA profiles in muscle was compromised after 24 h at ambient temperature (~20°C), making these degraded samples unreliable for accurate determination of dietary sources, yet sub-dermal tissue retained stable FA profiles under the same conditions, suggesting it may be a more robust tissue for trophic ecology work with potentially degraded samples. However, muscle samples archived for up to 16 years in −20°C retain their FA profiles, highlighting that tissue from museum or private collections can yield valid insights into the trophic ecology of marine elasmobranchs.http://journal.frontiersin.org/article/10.3389/fmars.2017.00369/fullbiochemical tracerelasmobranchbiopsytrophic ecologywhite sharkCarcharodon carcharias |
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DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Lauren Meyer Lauren Meyer Heidi Pethybridge Peter D. Nichols Crystal Beckmann Barry D. Bruce Jonathan M. Werry Charlie Huveneers |
spellingShingle |
Lauren Meyer Lauren Meyer Heidi Pethybridge Peter D. Nichols Crystal Beckmann Barry D. Bruce Jonathan M. Werry Charlie Huveneers Assessing the Functional Limitations of Lipids and Fatty Acids for Diet Determination: The Importance of Tissue Type, Quantity, and Quality Frontiers in Marine Science biochemical tracer elasmobranch biopsy trophic ecology white shark Carcharodon carcharias |
author_facet |
Lauren Meyer Lauren Meyer Heidi Pethybridge Peter D. Nichols Crystal Beckmann Barry D. Bruce Jonathan M. Werry Charlie Huveneers |
author_sort |
Lauren Meyer |
title |
Assessing the Functional Limitations of Lipids and Fatty Acids for Diet Determination: The Importance of Tissue Type, Quantity, and Quality |
title_short |
Assessing the Functional Limitations of Lipids and Fatty Acids for Diet Determination: The Importance of Tissue Type, Quantity, and Quality |
title_full |
Assessing the Functional Limitations of Lipids and Fatty Acids for Diet Determination: The Importance of Tissue Type, Quantity, and Quality |
title_fullStr |
Assessing the Functional Limitations of Lipids and Fatty Acids for Diet Determination: The Importance of Tissue Type, Quantity, and Quality |
title_full_unstemmed |
Assessing the Functional Limitations of Lipids and Fatty Acids for Diet Determination: The Importance of Tissue Type, Quantity, and Quality |
title_sort |
assessing the functional limitations of lipids and fatty acids for diet determination: the importance of tissue type, quantity, and quality |
publisher |
Frontiers Media S.A. |
series |
Frontiers in Marine Science |
issn |
2296-7745 |
publishDate |
2017-11-01 |
description |
Lipid and fatty acid (FA) analysis is commonly used to describe the trophic ecology of an increasing number of taxa. However, the applicability of these analyses is contingent upon the collection and storage of sufficient high quality tissue, the limitations of which are previously unexplored in elasmobranchs. Using samples from 110 white sharks, Carcharodon carcharias, collected throughout Australia, we investigated the importance of tissue type, sample quantity, and quality for reliable lipid class and FA analysis. We determined that muscle and sub-dermal tissue contain distinct lipid class and FA profiles, and were not directly comparable. Muscle samples as small as 12 mg dry weight (49 mg wet weight), provided reliable and consistent FA profiles, while sub-dermal tissue samples of 40 mg dry weight (186 mg wet weight) or greater were required to yield consistent profiles. This validates the suitability of minimally invasive sampling methods such as punch biopsies. The integrity of FA profiles in muscle was compromised after 24 h at ambient temperature (~20°C), making these degraded samples unreliable for accurate determination of dietary sources, yet sub-dermal tissue retained stable FA profiles under the same conditions, suggesting it may be a more robust tissue for trophic ecology work with potentially degraded samples. However, muscle samples archived for up to 16 years in −20°C retain their FA profiles, highlighting that tissue from museum or private collections can yield valid insights into the trophic ecology of marine elasmobranchs. |
topic |
biochemical tracer elasmobranch biopsy trophic ecology white shark Carcharodon carcharias |
url |
http://journal.frontiersin.org/article/10.3389/fmars.2017.00369/full |
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