Bacterial Communities from the Arsenic Mine in Złoty Stok, Sudety Mountains, Poland

Investigations of bacterial communities and characterization of mineralogy of the environment in the Złoty Stok As-Au deposit werecarried out. PXRD analysis revealed the presence of picropharmacolite as the most common secondary arsenic mineral in the mine. Total DNA was extracted from slime streams...

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Main Authors: Tomasz Cłapa, Dorota Narożna, Rafał Siuda, Andrzej Borkowski, Marek Selwet, Cezary J. Mądrzak, Ewa Koźlecka
Format: Article
Language:English
Published: Exeley Inc. 2017-09-01
Series:Polish Journal of Microbiology
Subjects:
Online Access:https://www.exeley.com/exeley/journals/polish_journal_of_microbiology/66/3/pdf/10.5604_01.3001.0010.4875.pdf
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spelling doaj-3b35f2b4957942dcaf93662668feca692020-11-25T02:32:53ZengExeley Inc.Polish Journal of Microbiology1733-13312544-46462017-09-0166310.5604/01.3001.0010.4875Bacterial Communities from the Arsenic Mine in Złoty Stok, Sudety Mountains, PolandTomasz Cłapa0Dorota Narożna1Rafał Siuda2Andrzej Borkowski3Marek Selwet4Cezary J. Mądrzak5Ewa Koźlecka6Department of General and Environmental Microbiology, Poznań University of Life Sciences, Poznań, PolandDepartment of Biochemistry and Biotechnology, Poznań University of Life Sciences, Poznań, PolandFaculty of Geology, University of Warsaw, PolandFaculty of Geology, University of Warsaw, PolandDepartment of General and Environmental Microbiology, Poznań University of Life Sciences, Poznań, PolandDepartment of Biochemistry and Biotechnology, Poznań University of Life Sciences, Poznań, PolandDepartment of General and Environmental Microbiology, Poznań University of Life Sciences, Poznań, PolandInvestigations of bacterial communities and characterization of mineralogy of the environment in the Złoty Stok As-Au deposit werecarried out. PXRD analysis revealed the presence of picropharmacolite as the most common secondary arsenic mineral in the mine. Total DNA was extracted from slime streams or slime biofilms samples to investigate the bacterial communities. PCR amplification of 16S rDNA was performed followed by subcloning of its products. Over 170 clones were analyzed by means of RFLP method. Eight group of clones representing different restriction patterns were identified. The nucleotide sequences of their inserts suggest that bacteria present in the mine environment belong to: Flavobacteria, Sphingobacteriia, Bacteroides, Proteobacteria, Mollicutes and Firmicutes. The metagenomic approach allows to demonstrate a higher diversity of microbiota than classical microbiological studies of cultivable isolates.https://www.exeley.com/exeley/journals/polish_journal_of_microbiology/66/3/pdf/10.5604_01.3001.0010.4875.pdfarsenic mine ecosystemmetagenomic approachmicrobial communitysupergene minerals
collection DOAJ
language English
format Article
sources DOAJ
author Tomasz Cłapa
Dorota Narożna
Rafał Siuda
Andrzej Borkowski
Marek Selwet
Cezary J. Mądrzak
Ewa Koźlecka
spellingShingle Tomasz Cłapa
Dorota Narożna
Rafał Siuda
Andrzej Borkowski
Marek Selwet
Cezary J. Mądrzak
Ewa Koźlecka
Bacterial Communities from the Arsenic Mine in Złoty Stok, Sudety Mountains, Poland
Polish Journal of Microbiology
arsenic mine ecosystem
metagenomic approach
microbial community
supergene minerals
author_facet Tomasz Cłapa
Dorota Narożna
Rafał Siuda
Andrzej Borkowski
Marek Selwet
Cezary J. Mądrzak
Ewa Koźlecka
author_sort Tomasz Cłapa
title Bacterial Communities from the Arsenic Mine in Złoty Stok, Sudety Mountains, Poland
title_short Bacterial Communities from the Arsenic Mine in Złoty Stok, Sudety Mountains, Poland
title_full Bacterial Communities from the Arsenic Mine in Złoty Stok, Sudety Mountains, Poland
title_fullStr Bacterial Communities from the Arsenic Mine in Złoty Stok, Sudety Mountains, Poland
title_full_unstemmed Bacterial Communities from the Arsenic Mine in Złoty Stok, Sudety Mountains, Poland
title_sort bacterial communities from the arsenic mine in złoty stok, sudety mountains, poland
publisher Exeley Inc.
series Polish Journal of Microbiology
issn 1733-1331
2544-4646
publishDate 2017-09-01
description Investigations of bacterial communities and characterization of mineralogy of the environment in the Złoty Stok As-Au deposit werecarried out. PXRD analysis revealed the presence of picropharmacolite as the most common secondary arsenic mineral in the mine. Total DNA was extracted from slime streams or slime biofilms samples to investigate the bacterial communities. PCR amplification of 16S rDNA was performed followed by subcloning of its products. Over 170 clones were analyzed by means of RFLP method. Eight group of clones representing different restriction patterns were identified. The nucleotide sequences of their inserts suggest that bacteria present in the mine environment belong to: Flavobacteria, Sphingobacteriia, Bacteroides, Proteobacteria, Mollicutes and Firmicutes. The metagenomic approach allows to demonstrate a higher diversity of microbiota than classical microbiological studies of cultivable isolates.
topic arsenic mine ecosystem
metagenomic approach
microbial community
supergene minerals
url https://www.exeley.com/exeley/journals/polish_journal_of_microbiology/66/3/pdf/10.5604_01.3001.0010.4875.pdf
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