Bacterial Communities from the Arsenic Mine in Złoty Stok, Sudety Mountains, Poland
Investigations of bacterial communities and characterization of mineralogy of the environment in the Złoty Stok As-Au deposit werecarried out. PXRD analysis revealed the presence of picropharmacolite as the most common secondary arsenic mineral in the mine. Total DNA was extracted from slime streams...
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doaj-3b35f2b4957942dcaf93662668feca692020-11-25T02:32:53ZengExeley Inc.Polish Journal of Microbiology1733-13312544-46462017-09-0166310.5604/01.3001.0010.4875Bacterial Communities from the Arsenic Mine in Złoty Stok, Sudety Mountains, PolandTomasz Cłapa0Dorota Narożna1Rafał Siuda2Andrzej Borkowski3Marek Selwet4Cezary J. Mądrzak5Ewa Koźlecka6Department of General and Environmental Microbiology, Poznań University of Life Sciences, Poznań, PolandDepartment of Biochemistry and Biotechnology, Poznań University of Life Sciences, Poznań, PolandFaculty of Geology, University of Warsaw, PolandFaculty of Geology, University of Warsaw, PolandDepartment of General and Environmental Microbiology, Poznań University of Life Sciences, Poznań, PolandDepartment of Biochemistry and Biotechnology, Poznań University of Life Sciences, Poznań, PolandDepartment of General and Environmental Microbiology, Poznań University of Life Sciences, Poznań, PolandInvestigations of bacterial communities and characterization of mineralogy of the environment in the Złoty Stok As-Au deposit werecarried out. PXRD analysis revealed the presence of picropharmacolite as the most common secondary arsenic mineral in the mine. Total DNA was extracted from slime streams or slime biofilms samples to investigate the bacterial communities. PCR amplification of 16S rDNA was performed followed by subcloning of its products. Over 170 clones were analyzed by means of RFLP method. Eight group of clones representing different restriction patterns were identified. The nucleotide sequences of their inserts suggest that bacteria present in the mine environment belong to: Flavobacteria, Sphingobacteriia, Bacteroides, Proteobacteria, Mollicutes and Firmicutes. The metagenomic approach allows to demonstrate a higher diversity of microbiota than classical microbiological studies of cultivable isolates.https://www.exeley.com/exeley/journals/polish_journal_of_microbiology/66/3/pdf/10.5604_01.3001.0010.4875.pdfarsenic mine ecosystemmetagenomic approachmicrobial communitysupergene minerals |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Tomasz Cłapa Dorota Narożna Rafał Siuda Andrzej Borkowski Marek Selwet Cezary J. Mądrzak Ewa Koźlecka |
spellingShingle |
Tomasz Cłapa Dorota Narożna Rafał Siuda Andrzej Borkowski Marek Selwet Cezary J. Mądrzak Ewa Koźlecka Bacterial Communities from the Arsenic Mine in Złoty Stok, Sudety Mountains, Poland Polish Journal of Microbiology arsenic mine ecosystem metagenomic approach microbial community supergene minerals |
author_facet |
Tomasz Cłapa Dorota Narożna Rafał Siuda Andrzej Borkowski Marek Selwet Cezary J. Mądrzak Ewa Koźlecka |
author_sort |
Tomasz Cłapa |
title |
Bacterial Communities from the Arsenic Mine in Złoty Stok, Sudety Mountains, Poland |
title_short |
Bacterial Communities from the Arsenic Mine in Złoty Stok, Sudety Mountains, Poland |
title_full |
Bacterial Communities from the Arsenic Mine in Złoty Stok, Sudety Mountains, Poland |
title_fullStr |
Bacterial Communities from the Arsenic Mine in Złoty Stok, Sudety Mountains, Poland |
title_full_unstemmed |
Bacterial Communities from the Arsenic Mine in Złoty Stok, Sudety Mountains, Poland |
title_sort |
bacterial communities from the arsenic mine in złoty stok, sudety mountains, poland |
publisher |
Exeley Inc. |
series |
Polish Journal of Microbiology |
issn |
1733-1331 2544-4646 |
publishDate |
2017-09-01 |
description |
Investigations of bacterial communities and characterization of mineralogy of the environment in the Złoty Stok As-Au deposit werecarried out. PXRD analysis revealed the presence of picropharmacolite as the most common secondary arsenic mineral in the mine. Total DNA was extracted from slime streams or slime biofilms samples to investigate the bacterial communities. PCR amplification of 16S rDNA was performed followed by subcloning of its products. Over 170 clones were analyzed by means of RFLP method. Eight group of clones representing different restriction patterns were identified. The nucleotide sequences of their inserts suggest that bacteria present in the mine environment belong to: Flavobacteria, Sphingobacteriia, Bacteroides, Proteobacteria, Mollicutes and Firmicutes. The metagenomic approach allows to demonstrate a higher diversity of microbiota than classical microbiological studies of cultivable isolates. |
topic |
arsenic mine ecosystem metagenomic approach microbial community supergene minerals |
url |
https://www.exeley.com/exeley/journals/polish_journal_of_microbiology/66/3/pdf/10.5604_01.3001.0010.4875.pdf |
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