Sub-clustering in skeletal class III malocclusion phenotypes via principal component analysis in a southern European population
Abstract The main aim of this study was to generate an adequate sub-phenotypic clustering model of class III skeletal malocclusion in an adult population of southern European origin. The study design was conducted in two phases, a preliminary cross-sectional study and a subsequent discriminatory eva...
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doaj-3aa2bdb4bff3432ca2410c175d443bdc2020-12-08T10:11:25ZengNature Publishing GroupScientific Reports2045-23222020-10-0110111210.1038/s41598-020-74488-wSub-clustering in skeletal class III malocclusion phenotypes via principal component analysis in a southern European populationL. de Frutos-Valle0C. Martin1J. A. Alarcón2J. C. Palma-Fernández3R. Ortega4A. Iglesias-Linares5Section of Orthodontics, Faculty of Odontology, Complutense UniversitySection of Orthodontics, Faculty of Odontology, Complutense UniversitySection of Orthodontics, Faculty of Odontology, University of GranadaSection of Orthodontics, Faculty of Odontology, Complutense UniversityFaculty of Odontology, Complutense UniversitySection of Orthodontics, Faculty of Odontology, Complutense UniversityAbstract The main aim of this study was to generate an adequate sub-phenotypic clustering model of class III skeletal malocclusion in an adult population of southern European origin. The study design was conducted in two phases, a preliminary cross-sectional study and a subsequent discriminatory evaluation by main component and cluster analysis to identify differentiated skeletal sub-groups with differentiated phenotypic characteristics. Radiometric data from 699 adult patients of southern European origin were analyzed in 212 selected subjects affected by class III skeletal malocclusion. The varimax rotation was used with Kaiser normalization, to prevent variables with more explanatory capacity from affecting the rotation. A total of 21,624 radiographic measurements were obtained as part of the cluster model generation, using a total set of 55 skeletal variables for the subsequent analysis of the major component and cluster analyses. Ten main axes were generated representing 92.7% of the total variation. Three main components represented 58.5%, with particular sagittal and vertical variables acting as major descriptors. Post hoc phenotypic clustering retrieved six clusters: C1:9.9%, C2:18.9%, C3:33%, C4:3.77%, C5:16%, and C6:16%. In conclusion, phenotypic variation was found in the southern European skeletal class III population, demonstrating the existence of phenotypic variations between identified clusters in different ethnic groups.https://doi.org/10.1038/s41598-020-74488-w |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
L. de Frutos-Valle C. Martin J. A. Alarcón J. C. Palma-Fernández R. Ortega A. Iglesias-Linares |
spellingShingle |
L. de Frutos-Valle C. Martin J. A. Alarcón J. C. Palma-Fernández R. Ortega A. Iglesias-Linares Sub-clustering in skeletal class III malocclusion phenotypes via principal component analysis in a southern European population Scientific Reports |
author_facet |
L. de Frutos-Valle C. Martin J. A. Alarcón J. C. Palma-Fernández R. Ortega A. Iglesias-Linares |
author_sort |
L. de Frutos-Valle |
title |
Sub-clustering in skeletal class III malocclusion phenotypes via principal component analysis in a southern European population |
title_short |
Sub-clustering in skeletal class III malocclusion phenotypes via principal component analysis in a southern European population |
title_full |
Sub-clustering in skeletal class III malocclusion phenotypes via principal component analysis in a southern European population |
title_fullStr |
Sub-clustering in skeletal class III malocclusion phenotypes via principal component analysis in a southern European population |
title_full_unstemmed |
Sub-clustering in skeletal class III malocclusion phenotypes via principal component analysis in a southern European population |
title_sort |
sub-clustering in skeletal class iii malocclusion phenotypes via principal component analysis in a southern european population |
publisher |
Nature Publishing Group |
series |
Scientific Reports |
issn |
2045-2322 |
publishDate |
2020-10-01 |
description |
Abstract The main aim of this study was to generate an adequate sub-phenotypic clustering model of class III skeletal malocclusion in an adult population of southern European origin. The study design was conducted in two phases, a preliminary cross-sectional study and a subsequent discriminatory evaluation by main component and cluster analysis to identify differentiated skeletal sub-groups with differentiated phenotypic characteristics. Radiometric data from 699 adult patients of southern European origin were analyzed in 212 selected subjects affected by class III skeletal malocclusion. The varimax rotation was used with Kaiser normalization, to prevent variables with more explanatory capacity from affecting the rotation. A total of 21,624 radiographic measurements were obtained as part of the cluster model generation, using a total set of 55 skeletal variables for the subsequent analysis of the major component and cluster analyses. Ten main axes were generated representing 92.7% of the total variation. Three main components represented 58.5%, with particular sagittal and vertical variables acting as major descriptors. Post hoc phenotypic clustering retrieved six clusters: C1:9.9%, C2:18.9%, C3:33%, C4:3.77%, C5:16%, and C6:16%. In conclusion, phenotypic variation was found in the southern European skeletal class III population, demonstrating the existence of phenotypic variations between identified clusters in different ethnic groups. |
url |
https://doi.org/10.1038/s41598-020-74488-w |
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