Patient-Specific Pose Estimation in Clinical Environments

Reliable posture labels in hospital environments can augment research studies on neural correlates to natural behaviors and clinical applications that monitor patient activity. However, many existing pose estimation frameworks are not calibrated for these unpredictable settings. In this paper, we pr...

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Main Authors: Kenny Chen, Paolo Gabriel, Abdulwahab Alasfour, Chenghao Gong, Werner K. Doyle, Orrin Devinsky, Daniel Friedman, Patricia Dugan, Lucia Melloni, Thomas Thesen, David Gonda, Shifteh Sattar, Sonya Wang, Vikash Gilja
Format: Article
Language:English
Published: IEEE 2018-01-01
Series:IEEE Journal of Translational Engineering in Health and Medicine
Subjects:
Online Access:https://ieeexplore.ieee.org/document/8490852/
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spelling doaj-3a8cac4742b0487d9d1b388c89b073332021-04-05T16:56:39ZengIEEEIEEE Journal of Translational Engineering in Health and Medicine2168-23722018-01-01611110.1109/JTEHM.2018.28754648490852Patient-Specific Pose Estimation in Clinical EnvironmentsKenny Chen0https://orcid.org/0000-0002-0494-8806Paolo Gabriel1Abdulwahab Alasfour2Chenghao Gong3https://orcid.org/0000-0002-8311-004XWerner K. Doyle4Orrin Devinsky5Daniel Friedman6https://orcid.org/0000-0003-1068-1797Patricia Dugan7Lucia Melloni8https://orcid.org/0000-0001-8743-5071Thomas Thesen9David Gonda10Shifteh Sattar11Sonya Wang12https://orcid.org/0000-0003-4429-0508Vikash Gilja13https://orcid.org/0000-0002-0619-2686Department of Electrical and Computer Engineering, University of California at San Diego, La Jolla, CA, USADepartment of Electrical and Computer Engineering, University of California at San Diego, La Jolla, CA, USADepartment of Electrical and Computer Engineering, University of California at San Diego, La Jolla, CA, USADepartment of Electrical and Computer Engineering, University of California at San Diego, La Jolla, CA, USAComprehensive Epilepsy Center, NYU Langone Medical Center, New York, NY, USAComprehensive Epilepsy Center, NYU Langone Medical Center, New York, NY, USAComprehensive Epilepsy Center, NYU Langone Medical Center, New York, NY, USAComprehensive Epilepsy Center, NYU Langone Medical Center, New York, NY, USAComprehensive Epilepsy Center, NYU Langone Medical Center, New York, NY, USAComprehensive Epilepsy Center, NYU Langone Medical Center, New York, NY, USARady Children’s Hospital of San Diego, San Diego, CA, USARady Children’s Hospital of San Diego, San Diego, CA, USADepartment of Neurology, University of Minnesota Twin Cities, Minneapolis, MN, USADepartment of Electrical and Computer Engineering, University of California at San Diego, La Jolla, CA, USAReliable posture labels in hospital environments can augment research studies on neural correlates to natural behaviors and clinical applications that monitor patient activity. However, many existing pose estimation frameworks are not calibrated for these unpredictable settings. In this paper, we propose a semi-automated approach for improving upper-body pose estimation in noisy clinical environments, whereby we adapt and build around an existing joint tracking framework to improve its robustness to environmental uncertainties. The proposed framework uses subject-specific convolutional neural network models trained on a subset of a patient's RGB video recording chosen to maximize the feature variance of each joint. Furthermore, by compensating for scene lighting changes and by refining the predicted joint trajectories through a Kalman filter with fitted noise parameters, the extended system yields more consistent and accurate posture annotations when compared with the two state-of-the-art generalized pose tracking algorithms for three hospital patients recorded in two research clinics.https://ieeexplore.ieee.org/document/8490852/Clinical environmentsconvolutional neural networksKalman filterpatient monitoringpose estimation
collection DOAJ
language English
format Article
sources DOAJ
author Kenny Chen
Paolo Gabriel
Abdulwahab Alasfour
Chenghao Gong
Werner K. Doyle
Orrin Devinsky
Daniel Friedman
Patricia Dugan
Lucia Melloni
Thomas Thesen
David Gonda
Shifteh Sattar
Sonya Wang
Vikash Gilja
spellingShingle Kenny Chen
Paolo Gabriel
Abdulwahab Alasfour
Chenghao Gong
Werner K. Doyle
Orrin Devinsky
Daniel Friedman
Patricia Dugan
Lucia Melloni
Thomas Thesen
David Gonda
Shifteh Sattar
Sonya Wang
Vikash Gilja
Patient-Specific Pose Estimation in Clinical Environments
IEEE Journal of Translational Engineering in Health and Medicine
Clinical environments
convolutional neural networks
Kalman filter
patient monitoring
pose estimation
author_facet Kenny Chen
Paolo Gabriel
Abdulwahab Alasfour
Chenghao Gong
Werner K. Doyle
Orrin Devinsky
Daniel Friedman
Patricia Dugan
Lucia Melloni
Thomas Thesen
David Gonda
Shifteh Sattar
Sonya Wang
Vikash Gilja
author_sort Kenny Chen
title Patient-Specific Pose Estimation in Clinical Environments
title_short Patient-Specific Pose Estimation in Clinical Environments
title_full Patient-Specific Pose Estimation in Clinical Environments
title_fullStr Patient-Specific Pose Estimation in Clinical Environments
title_full_unstemmed Patient-Specific Pose Estimation in Clinical Environments
title_sort patient-specific pose estimation in clinical environments
publisher IEEE
series IEEE Journal of Translational Engineering in Health and Medicine
issn 2168-2372
publishDate 2018-01-01
description Reliable posture labels in hospital environments can augment research studies on neural correlates to natural behaviors and clinical applications that monitor patient activity. However, many existing pose estimation frameworks are not calibrated for these unpredictable settings. In this paper, we propose a semi-automated approach for improving upper-body pose estimation in noisy clinical environments, whereby we adapt and build around an existing joint tracking framework to improve its robustness to environmental uncertainties. The proposed framework uses subject-specific convolutional neural network models trained on a subset of a patient's RGB video recording chosen to maximize the feature variance of each joint. Furthermore, by compensating for scene lighting changes and by refining the predicted joint trajectories through a Kalman filter with fitted noise parameters, the extended system yields more consistent and accurate posture annotations when compared with the two state-of-the-art generalized pose tracking algorithms for three hospital patients recorded in two research clinics.
topic Clinical environments
convolutional neural networks
Kalman filter
patient monitoring
pose estimation
url https://ieeexplore.ieee.org/document/8490852/
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