A Machine Learning Approach to Detecting Pine Wilt Disease Using Airborne Spectral Imagery

Pine Wilt Disease is one of the most destructive pests affecting coniferous forests. After being infected by the harmful <i>Bursaphelenchus</i><i> </i><i>xylophilus</i> nematode, most trees die within one year. The complex spreading pattern of the disease and the...

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Main Authors: Marian-Daniel Iordache, Vasco Mantas, Elsa Baltazar, Klaas Pauly, Nicolas Lewyckyj
Format: Article
Language:English
Published: MDPI AG 2020-07-01
Series:Remote Sensing
Subjects:
Online Access:https://www.mdpi.com/2072-4292/12/14/2280
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spelling doaj-3a165274f1074586a112d2411f048cb62020-11-25T03:02:58ZengMDPI AGRemote Sensing2072-42922020-07-01122280228010.3390/rs12142280A Machine Learning Approach to Detecting Pine Wilt Disease Using Airborne Spectral ImageryMarian-Daniel Iordache0Vasco Mantas1Elsa Baltazar2Klaas Pauly3Nicolas Lewyckyj4Flemish Institute for Technological Research, Center for Remote Sensing and Earth Observation Processes (VITO-TAP), Boeretang 200, B-2400 Mol, BelgiumDepartment of Earth Sciences, University of Coimbra, 3004-531 Coimbra, PortugalDepartment of Earth Sciences, University of Coimbra, 3004-531 Coimbra, PortugalFlemish Institute for Technological Research, Center for Remote Sensing and Earth Observation Processes (VITO-TAP), Boeretang 200, B-2400 Mol, BelgiumFlemish Institute for Technological Research, Center for Remote Sensing and Earth Observation Processes (VITO-TAP), Boeretang 200, B-2400 Mol, BelgiumPine Wilt Disease is one of the most destructive pests affecting coniferous forests. After being infected by the harmful <i>Bursaphelenchus</i><i> </i><i>xylophilus</i> nematode, most trees die within one year. The complex spreading pattern of the disease and the tedious hard labor process of diagnosis involving field wood sampling followed by<i> </i>laboratory analysis call for alternative methods to detect and manage the infected areas. Remote sensing comes naturally into play owing to the possibility of covering relatively large areas and the ability to discriminate healthy from sick trees based on spectral characteristics. This paper presents the development of machine learning classification algorithms for the detection of Pine Wilt Disease in <i>Pinus pinaster</i>, performed in the framework of the European Commission’s Horizon 2020 project “Operational Forest Monitoring using Copernicus and UAV Hyperspectral Data” (FOCUS) in two provinces of central Portugal. Five flight campaigns have been carried out in two consecutive years in order to capture a multitemporal variation of disease distribution. Classification algorithms based on a Random Forest approach were separately designed for the acquired very-high-resolution multispectral and hyperspectral data, respectively. Both algorithms achieved overall accuracies higher than 0.91 in test data. Furthermore, our study shows that the early detection of decaying trees is feasible, even before symptoms are visible in the field.https://www.mdpi.com/2072-4292/12/14/2280Pine Wilt Diseaseremote sensingmachine learningclassificationmultispectralhyperspectral
collection DOAJ
language English
format Article
sources DOAJ
author Marian-Daniel Iordache
Vasco Mantas
Elsa Baltazar
Klaas Pauly
Nicolas Lewyckyj
spellingShingle Marian-Daniel Iordache
Vasco Mantas
Elsa Baltazar
Klaas Pauly
Nicolas Lewyckyj
A Machine Learning Approach to Detecting Pine Wilt Disease Using Airborne Spectral Imagery
Remote Sensing
Pine Wilt Disease
remote sensing
machine learning
classification
multispectral
hyperspectral
author_facet Marian-Daniel Iordache
Vasco Mantas
Elsa Baltazar
Klaas Pauly
Nicolas Lewyckyj
author_sort Marian-Daniel Iordache
title A Machine Learning Approach to Detecting Pine Wilt Disease Using Airborne Spectral Imagery
title_short A Machine Learning Approach to Detecting Pine Wilt Disease Using Airborne Spectral Imagery
title_full A Machine Learning Approach to Detecting Pine Wilt Disease Using Airborne Spectral Imagery
title_fullStr A Machine Learning Approach to Detecting Pine Wilt Disease Using Airborne Spectral Imagery
title_full_unstemmed A Machine Learning Approach to Detecting Pine Wilt Disease Using Airborne Spectral Imagery
title_sort machine learning approach to detecting pine wilt disease using airborne spectral imagery
publisher MDPI AG
series Remote Sensing
issn 2072-4292
publishDate 2020-07-01
description Pine Wilt Disease is one of the most destructive pests affecting coniferous forests. After being infected by the harmful <i>Bursaphelenchus</i><i> </i><i>xylophilus</i> nematode, most trees die within one year. The complex spreading pattern of the disease and the tedious hard labor process of diagnosis involving field wood sampling followed by<i> </i>laboratory analysis call for alternative methods to detect and manage the infected areas. Remote sensing comes naturally into play owing to the possibility of covering relatively large areas and the ability to discriminate healthy from sick trees based on spectral characteristics. This paper presents the development of machine learning classification algorithms for the detection of Pine Wilt Disease in <i>Pinus pinaster</i>, performed in the framework of the European Commission’s Horizon 2020 project “Operational Forest Monitoring using Copernicus and UAV Hyperspectral Data” (FOCUS) in two provinces of central Portugal. Five flight campaigns have been carried out in two consecutive years in order to capture a multitemporal variation of disease distribution. Classification algorithms based on a Random Forest approach were separately designed for the acquired very-high-resolution multispectral and hyperspectral data, respectively. Both algorithms achieved overall accuracies higher than 0.91 in test data. Furthermore, our study shows that the early detection of decaying trees is feasible, even before symptoms are visible in the field.
topic Pine Wilt Disease
remote sensing
machine learning
classification
multispectral
hyperspectral
url https://www.mdpi.com/2072-4292/12/14/2280
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