Spatial sampling bias and model complexity in stream‐based species distribution models: A case study of Paddlefish (Polyodon spathula) in the Arkansas River basin, USA
Abstract Leveraging existing presence records and geospatial datasets, species distribution modeling has been widely applied to informing species conservation and restoration efforts. Maxent is one of the most popular modeling algorithms, yet recent research has demonstrated Maxent models are vulner...
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doaj-3932f52abb9047f4a2bafdfcbdd426de2021-04-02T14:05:44ZengWileyEcology and Evolution2045-77582020-01-0110270571710.1002/ece3.5913Spatial sampling bias and model complexity in stream‐based species distribution models: A case study of Paddlefish (Polyodon spathula) in the Arkansas River basin, USAAndrew T. Taylor0Thomas Hafen1Colt T. Holley2Alin González3James M. Long4Oklahoma Cooperative Fish and Wildlife Research Unit Department of Natural Resource Ecology and Management Oklahoma State University Stillwater OK USAOklahoma Cooperative Fish and Wildlife Research Unit Department of Natural Resource Ecology and Management Oklahoma State University Stillwater OK USAU.S. Geological Survey Fort Peck Project Office Columbia Environmental Research Center Fort Peck MT USAOklahoma Cooperative Fish and Wildlife Research Unit Department of Natural Resource Ecology and Management Oklahoma State University Stillwater OK USAU.S. Geological Survey Oklahoma Cooperative Fish and Wildlife Research Unit Department of Natural Resource Ecology and Management Oklahoma State University Stillwater OK USAAbstract Leveraging existing presence records and geospatial datasets, species distribution modeling has been widely applied to informing species conservation and restoration efforts. Maxent is one of the most popular modeling algorithms, yet recent research has demonstrated Maxent models are vulnerable to prediction errors related to spatial sampling bias and model complexity. Despite elevated rates of biodiversity imperilment in stream ecosystems, the application of Maxent models to stream networks has lagged, as has the availability of tools to address potential sources of error and calculate model evaluation metrics when modeling in nonraster environments (such as stream networks). Herein, we use Maxent and customized R code to estimate the potential distribution of paddlefish (Polyodon spathula) at a stream‐segment level within the Arkansas River basin, USA, while accounting for potential spatial sampling bias and model complexity. Filtering the presence data appeared to adequately remove an eastward, large‐river sampling bias that was evident within the unfiltered presence dataset. In particular, our novel riverscape filter provided a repeatable means of obtaining a relatively even coverage of presence data among watersheds and streams of varying sizes. The greatest differences in estimated distributions were observed among models constructed with default versus AICC‐selected parameterization. Although all models had similarly high performance and evaluation metrics, the AICC‐selected models were more inclusive of westward‐situated and smaller, headwater streams. Overall, our results solidified the importance of accounting for model complexity and spatial sampling bias in SDMs constructed within stream networks and provided a roadmap for future paddlefish restoration efforts in the study area.https://doi.org/10.1002/ece3.5913conservation biologyecological niche modelfisheries managementMaxentriverscape ecology |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Andrew T. Taylor Thomas Hafen Colt T. Holley Alin González James M. Long |
spellingShingle |
Andrew T. Taylor Thomas Hafen Colt T. Holley Alin González James M. Long Spatial sampling bias and model complexity in stream‐based species distribution models: A case study of Paddlefish (Polyodon spathula) in the Arkansas River basin, USA Ecology and Evolution conservation biology ecological niche model fisheries management Maxent riverscape ecology |
author_facet |
Andrew T. Taylor Thomas Hafen Colt T. Holley Alin González James M. Long |
author_sort |
Andrew T. Taylor |
title |
Spatial sampling bias and model complexity in stream‐based species distribution models: A case study of Paddlefish (Polyodon spathula) in the Arkansas River basin, USA |
title_short |
Spatial sampling bias and model complexity in stream‐based species distribution models: A case study of Paddlefish (Polyodon spathula) in the Arkansas River basin, USA |
title_full |
Spatial sampling bias and model complexity in stream‐based species distribution models: A case study of Paddlefish (Polyodon spathula) in the Arkansas River basin, USA |
title_fullStr |
Spatial sampling bias and model complexity in stream‐based species distribution models: A case study of Paddlefish (Polyodon spathula) in the Arkansas River basin, USA |
title_full_unstemmed |
Spatial sampling bias and model complexity in stream‐based species distribution models: A case study of Paddlefish (Polyodon spathula) in the Arkansas River basin, USA |
title_sort |
spatial sampling bias and model complexity in stream‐based species distribution models: a case study of paddlefish (polyodon spathula) in the arkansas river basin, usa |
publisher |
Wiley |
series |
Ecology and Evolution |
issn |
2045-7758 |
publishDate |
2020-01-01 |
description |
Abstract Leveraging existing presence records and geospatial datasets, species distribution modeling has been widely applied to informing species conservation and restoration efforts. Maxent is one of the most popular modeling algorithms, yet recent research has demonstrated Maxent models are vulnerable to prediction errors related to spatial sampling bias and model complexity. Despite elevated rates of biodiversity imperilment in stream ecosystems, the application of Maxent models to stream networks has lagged, as has the availability of tools to address potential sources of error and calculate model evaluation metrics when modeling in nonraster environments (such as stream networks). Herein, we use Maxent and customized R code to estimate the potential distribution of paddlefish (Polyodon spathula) at a stream‐segment level within the Arkansas River basin, USA, while accounting for potential spatial sampling bias and model complexity. Filtering the presence data appeared to adequately remove an eastward, large‐river sampling bias that was evident within the unfiltered presence dataset. In particular, our novel riverscape filter provided a repeatable means of obtaining a relatively even coverage of presence data among watersheds and streams of varying sizes. The greatest differences in estimated distributions were observed among models constructed with default versus AICC‐selected parameterization. Although all models had similarly high performance and evaluation metrics, the AICC‐selected models were more inclusive of westward‐situated and smaller, headwater streams. Overall, our results solidified the importance of accounting for model complexity and spatial sampling bias in SDMs constructed within stream networks and provided a roadmap for future paddlefish restoration efforts in the study area. |
topic |
conservation biology ecological niche model fisheries management Maxent riverscape ecology |
url |
https://doi.org/10.1002/ece3.5913 |
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