Comparison of multiplex cytokine assays in a pediatric cohort with epilepsy

Background: Multiplex analyses allow for detection of dozens of cytokines/chemokines in small sample volumes. Although several commercially available assay kits are available, there are no comparative data in plasma measurements among pediatric or epilepsy cohorts. New method: Cohort study of 38 chi...

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Main Authors: Adam L. Numis, Christine H. Fox, Daniel J. Lowenstein, Philip J. Norris, Clara Di Germanio
Format: Article
Language:English
Published: Elsevier 2021-03-01
Series:Heliyon
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2405844021005508
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spelling doaj-388a6c910b5e4b78914d5b3e0d585ae62021-04-09T10:08:51ZengElsevierHeliyon2405-84402021-03-0173e06445Comparison of multiplex cytokine assays in a pediatric cohort with epilepsyAdam L. Numis0Christine H. Fox1Daniel J. Lowenstein2Philip J. Norris3Clara Di Germanio4University of California, San Francisco, Department of Neurology &amp; Pediatrics, 675 Nelson Rising Lange, San Francisco, CA 94158 USA; Corresponding author.University of California, San Francisco, Department of Neurology &amp; Pediatrics, 675 Nelson Rising Lange, San Francisco, CA 94158 USADepartment of Neurology, University of California, San Francisco USAVitalant Research Institute, 270 Masonic Avenue, San Francisco, CA 94118-4417 USA; Departments of Medicine and Laboratory Medicine, University of California, San Francisco, 533 Parnassus Avenue, San Francisco, CA 94143 USAVitalant Research Institute, 270 Masonic Avenue, San Francisco, CA 94118-4417 USABackground: Multiplex analyses allow for detection of dozens of cytokines/chemokines in small sample volumes. Although several commercially available assay kits are available, there are no comparative data in plasma measurements among pediatric or epilepsy cohorts. New method: Cohort study of 38 children with epilepsy. We evaluated plasma levels of cytokines/chemokines using three different assays: Luminex® xMAP high-sensitivity (HS) and standard-sensitivity (SS) assays, and Meso-Scale Discovery (MSD). We calculated recovery rates of each analyte, correlation coefficients between assays, and level of agreement between measurements. We repeated analyses in a subset of samples after a single freeze-thaw cycle. Results: Among ten analytes common to all assays, HS had high recovery (<15% of values extrapolated or out-of- range [OOR]) for all analytes, SS for 50%, and MSD for 40%. While several analytes had a high correlation between assays, Bland-Altman plots demonstrated assays were not interchangeable. For most analytes, a single freeze-thaw cycle decreased cytokines/chemokine measurements. There was good correlation of measurements after a freeze-thaw cycle with acceptable agreement between measurements for six of 13 (46%) analytes using HS, one of 9 (11%) for SS, and none for MSD. Comparison with existing methods: HS assays may optimize yield in plasma for proteins of particular interest in epilepsy research, limit values extrapolated beyond the standard curve, and improve precision compared to other SS and MSD assays. Conclusion: Our results demonstrate assay choice may be critical to study results and support the need for a standardized approach to biomarker assessment across epilepsy research and other domains.http://www.sciencedirect.com/science/article/pii/S2405844021005508Pediatric epilepsyCytokinesChemokinesLuminexMeso-scale discoveryNeuro-inflammation
collection DOAJ
language English
format Article
sources DOAJ
author Adam L. Numis
Christine H. Fox
Daniel J. Lowenstein
Philip J. Norris
Clara Di Germanio
spellingShingle Adam L. Numis
Christine H. Fox
Daniel J. Lowenstein
Philip J. Norris
Clara Di Germanio
Comparison of multiplex cytokine assays in a pediatric cohort with epilepsy
Heliyon
Pediatric epilepsy
Cytokines
Chemokines
Luminex
Meso-scale discovery
Neuro-inflammation
author_facet Adam L. Numis
Christine H. Fox
Daniel J. Lowenstein
Philip J. Norris
Clara Di Germanio
author_sort Adam L. Numis
title Comparison of multiplex cytokine assays in a pediatric cohort with epilepsy
title_short Comparison of multiplex cytokine assays in a pediatric cohort with epilepsy
title_full Comparison of multiplex cytokine assays in a pediatric cohort with epilepsy
title_fullStr Comparison of multiplex cytokine assays in a pediatric cohort with epilepsy
title_full_unstemmed Comparison of multiplex cytokine assays in a pediatric cohort with epilepsy
title_sort comparison of multiplex cytokine assays in a pediatric cohort with epilepsy
publisher Elsevier
series Heliyon
issn 2405-8440
publishDate 2021-03-01
description Background: Multiplex analyses allow for detection of dozens of cytokines/chemokines in small sample volumes. Although several commercially available assay kits are available, there are no comparative data in plasma measurements among pediatric or epilepsy cohorts. New method: Cohort study of 38 children with epilepsy. We evaluated plasma levels of cytokines/chemokines using three different assays: Luminex® xMAP high-sensitivity (HS) and standard-sensitivity (SS) assays, and Meso-Scale Discovery (MSD). We calculated recovery rates of each analyte, correlation coefficients between assays, and level of agreement between measurements. We repeated analyses in a subset of samples after a single freeze-thaw cycle. Results: Among ten analytes common to all assays, HS had high recovery (<15% of values extrapolated or out-of- range [OOR]) for all analytes, SS for 50%, and MSD for 40%. While several analytes had a high correlation between assays, Bland-Altman plots demonstrated assays were not interchangeable. For most analytes, a single freeze-thaw cycle decreased cytokines/chemokine measurements. There was good correlation of measurements after a freeze-thaw cycle with acceptable agreement between measurements for six of 13 (46%) analytes using HS, one of 9 (11%) for SS, and none for MSD. Comparison with existing methods: HS assays may optimize yield in plasma for proteins of particular interest in epilepsy research, limit values extrapolated beyond the standard curve, and improve precision compared to other SS and MSD assays. Conclusion: Our results demonstrate assay choice may be critical to study results and support the need for a standardized approach to biomarker assessment across epilepsy research and other domains.
topic Pediatric epilepsy
Cytokines
Chemokines
Luminex
Meso-scale discovery
Neuro-inflammation
url http://www.sciencedirect.com/science/article/pii/S2405844021005508
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