IDCube Lite: Free Interactive Discovery Cube software for multi and hyperspectral applications

Multi- and hyperspectral imaging modalities encompass a growing number of spectral techniques that find many applications in geospatial, biomedical, machine vision and other fields. The rapidly increasing number of applications requires convenient easy-to-navigate software that can be used by new an...

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Main Authors: Deependra Mishra, Helena Hurbon, John Wang, Steven T. Wang, Tommy Du, Qian Wu, David Kim, Shiva Basir, Qian Cao, Hairong Zhang, Kathleen Xu, Andy Yu, Yifan Zhang, Yunshen Huang, Roman Garnett, Maria Gerasimchuk-Djordjevic, Mikhail Y. Berezin
Format: Article
Language:English
Published: IM Publications Open 2021-05-01
Series:Journal of Spectral Imaging
Subjects:
Online Access:https://www.impopen.com/jsi-abstract/I10_a1
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spelling doaj-38838a6cc97145f88b8cc0922a3c8a3f2021-06-14T13:41:38ZengIM Publications OpenJournal of Spectral Imaging2040-45652040-45652021-05-01101a110.1255/jsi.2021.a1IDCube Lite: Free Interactive Discovery Cube software for multi and hyperspectral applicationsDeependra Mishra0https://orcid.org/0000-0003-1578-8526Helena Hurbon1https://orcid.org/0000-0003-3181-6566John Wang2Steven T. Wang3https://orcid.org/0000-0002-5630-9010Tommy Du4Qian Wu5David Kim6Shiva Basir7Qian Cao8https://orcid.org/0000-0002-3900-0433Hairong Zhang9Kathleen Xu10Andy Yu11Yifan Zhang12Yunshen Huang13Roman Garnett14https://orcid.org/0000-0002-0152-5453Maria Gerasimchuk-Djordjevic15Mikhail Y. Berezin16https://orcid.org/0000-0002-2670-2487Department of Radiology, Washington University School of Medicine, 4515 McKinley Ave, St Louis, MO 63110, USADepartment of Radiology, Washington University School of Medicine, 4515 McKinley Ave, St Louis, MO 63110, USADepartment of Radiology, Washington University School of Medicine, 4515 McKinley Ave, St Louis, MO 63110, USA and HSpeQ LLC, 4340 Duncan Ave, St Louis, MO 63110, USADepartment of Radiology, Washington University School of Medicine, 4515 McKinley Ave, St Louis, MO 63110, USA and HSpeQ LLC, 4340 Duncan Ave, St Louis, MO 63110, USADepartment of Radiology, Washington University School of Medicine, 4515 McKinley Ave, St Louis, MO 63110, USADepartment of Radiology, Washington University School of Medicine, 4515 McKinley Ave, St Louis, MO 63110, USADepartment of Radiology, Washington University School of Medicine, 4515 McKinley Ave, St Louis, MO 63110, USADepartment of Radiology, Washington University School of Medicine, 4515 McKinley Ave, St Louis, MO 63110, USADepartment of Radiology, Washington University School of Medicine, 4515 McKinley Ave, St Louis, MO 63110, USADepartment of Radiology, Washington University School of Medicine, 4515 McKinley Ave, St Louis, MO 63110, USADepartment of Radiology, Washington University School of Medicine, 4515 McKinley Ave, St Louis, MO 63110, USADepartment of Radiology, Washington University School of Medicine, 4515 McKinley Ave, St Louis, MO 63110, USADepartment of Radiology, Washington University School of Medicine, 4515 McKinley Ave, St Louis, MO 63110, USADepartment of Radiology, Washington University School of Medicine, 4515 McKinley Ave, St Louis, MO 63110, USADepartment of Computer Science and Engineering, Washington University, 1 Brookings Hall, St Louis, MO 63110, USAArt and Design Department, Missouri State University, 901 S. National Ave, Springfield, MO 65897, USADepartment of Radiology, Washington University School of Medicine, 4515 McKinley Ave, St Louis, MO 63110, USA and HSpeQ LLC, 4340 Duncan Ave, St Louis, MO 63110, USAMulti- and hyperspectral imaging modalities encompass a growing number of spectral techniques that find many applications in geospatial, biomedical, machine vision and other fields. The rapidly increasing number of applications requires convenient easy-to-navigate software that can be used by new and experienced users to analyse data, and develop, apply and deploy novel algorithms. Herein, we present our platform, IDCube Lite, an Interactive Discovery Cube that performs essential operations in hyperspectral data analysis to realise the full potential of spectral imaging. The strength of the software lies in its interactive features that enable the users to optimise parameters and obtain visual input for the user in a way not previously accessible with other software packages. The entire software can be operated without any prior programming skills allowing interactive sessions of raw and processed data. IDCube Lite, a free version of the software described in the paper, has many benefits compared to existing packages and offers structural flexibility to discover new, hidden features that allow users to integrate novel computational methods.https://www.impopen.com/jsi-abstract/I10_a1hyperspectralmultispectralspectral imagingidcubesegmentationgeospatialbiomedical
collection DOAJ
language English
format Article
sources DOAJ
author Deependra Mishra
Helena Hurbon
John Wang
Steven T. Wang
Tommy Du
Qian Wu
David Kim
Shiva Basir
Qian Cao
Hairong Zhang
Kathleen Xu
Andy Yu
Yifan Zhang
Yunshen Huang
Roman Garnett
Maria Gerasimchuk-Djordjevic
Mikhail Y. Berezin
spellingShingle Deependra Mishra
Helena Hurbon
John Wang
Steven T. Wang
Tommy Du
Qian Wu
David Kim
Shiva Basir
Qian Cao
Hairong Zhang
Kathleen Xu
Andy Yu
Yifan Zhang
Yunshen Huang
Roman Garnett
Maria Gerasimchuk-Djordjevic
Mikhail Y. Berezin
IDCube Lite: Free Interactive Discovery Cube software for multi and hyperspectral applications
Journal of Spectral Imaging
hyperspectral
multispectral
spectral imaging
idcube
segmentation
geospatial
biomedical
author_facet Deependra Mishra
Helena Hurbon
John Wang
Steven T. Wang
Tommy Du
Qian Wu
David Kim
Shiva Basir
Qian Cao
Hairong Zhang
Kathleen Xu
Andy Yu
Yifan Zhang
Yunshen Huang
Roman Garnett
Maria Gerasimchuk-Djordjevic
Mikhail Y. Berezin
author_sort Deependra Mishra
title IDCube Lite: Free Interactive Discovery Cube software for multi and hyperspectral applications
title_short IDCube Lite: Free Interactive Discovery Cube software for multi and hyperspectral applications
title_full IDCube Lite: Free Interactive Discovery Cube software for multi and hyperspectral applications
title_fullStr IDCube Lite: Free Interactive Discovery Cube software for multi and hyperspectral applications
title_full_unstemmed IDCube Lite: Free Interactive Discovery Cube software for multi and hyperspectral applications
title_sort idcube lite: free interactive discovery cube software for multi and hyperspectral applications
publisher IM Publications Open
series Journal of Spectral Imaging
issn 2040-4565
2040-4565
publishDate 2021-05-01
description Multi- and hyperspectral imaging modalities encompass a growing number of spectral techniques that find many applications in geospatial, biomedical, machine vision and other fields. The rapidly increasing number of applications requires convenient easy-to-navigate software that can be used by new and experienced users to analyse data, and develop, apply and deploy novel algorithms. Herein, we present our platform, IDCube Lite, an Interactive Discovery Cube that performs essential operations in hyperspectral data analysis to realise the full potential of spectral imaging. The strength of the software lies in its interactive features that enable the users to optimise parameters and obtain visual input for the user in a way not previously accessible with other software packages. The entire software can be operated without any prior programming skills allowing interactive sessions of raw and processed data. IDCube Lite, a free version of the software described in the paper, has many benefits compared to existing packages and offers structural flexibility to discover new, hidden features that allow users to integrate novel computational methods.
topic hyperspectral
multispectral
spectral imaging
idcube
segmentation
geospatial
biomedical
url https://www.impopen.com/jsi-abstract/I10_a1
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