Estrogen Exposure, Metabolism, and Enzyme Variants in a Model for Breast Cancer Risk Prediction

Estrogen is a well-known risk factor for breast cancer. Current models of breast cancer risk prediction are based on cumulative estrogen exposure but do not directly reflect mammary estrogen metabolism or address genetic variability between women in exposure to carcinogenic estrogen metabolites. We...

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Main Authors: Fritz F. Parl, Kathleen M. Egan, Chun Li, Philip S. Crooke
Format: Article
Language:English
Published: SAGE Publishing 2009-01-01
Series:Cancer Informatics
Online Access:https://doi.org/10.4137/CIN.S2262
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spelling doaj-380db943a65b488cb59bdc1da0426d232020-11-25T03:56:48ZengSAGE PublishingCancer Informatics1176-93512009-01-01710.4137/CIN.S2262Estrogen Exposure, Metabolism, and Enzyme Variants in a Model for Breast Cancer Risk PredictionFritz F. Parl0Kathleen M. Egan1Chun Li2Philip S. Crooke3Departments of Pathology, H. Lee Moffitt Cancer Center and Research Institute, Tampa FL 33612.Division of Cancer Prevention and Control, H. Lee Moffitt Cancer Center and Research Institute, Tampa FL 33612.Biostatistics, Vanderbilt University, Nashville, TN 37232.Mathematics and Integrative Cancer Biology Center, Vanderbilt University, Nashville, TN 37232.Estrogen is a well-known risk factor for breast cancer. Current models of breast cancer risk prediction are based on cumulative estrogen exposure but do not directly reflect mammary estrogen metabolism or address genetic variability between women in exposure to carcinogenic estrogen metabolites. We are proposing a mathematical model that forecasts breast cancer risk for a woman based on three factors: (1) estimated estrogen exposure, (2) kinetic analysis of the oxidative estrogen metabolism pathway in the breast, and (3) enzyme genotypes responsible for inherited differences in the production of carcinogenic metabolites. The model incorporates the main components of mammary estrogen metabolism, i.e. the conversion of 17β-estradiol ( E 2 ) by the phase I and II enzymes cytochrome P450 ( CYP ) 1A1 and 1B1 , catechol-O-methyltransferase ( COMT ), and glutathione S-transferase P1 ( GSTP1 ) into reactive metabolites, including catechol estrogens and estrogen quinones, such as E 2 -3,4- Q which can damage DNA. Each of the four genes is genotyped and the SNP data used to derive the haplotype configuration for each subject. The model then utilizes the kinetic and genotypic data to calculate the amount of E 2 -3,4- Q carcinogen as ultimate risk factor for each woman. The proposed model extends existing models by combining the traditional “phenotypic” measures of estrogen exposure with genotypic data associated with the metabolic fate of E 2 as determined by critical phase I and II enzymes. Instead of providing a general risk estimate our model would predict the risk for each individual woman based on her age, reproductive experiences as well as her genotypic profile.https://doi.org/10.4137/CIN.S2262
collection DOAJ
language English
format Article
sources DOAJ
author Fritz F. Parl
Kathleen M. Egan
Chun Li
Philip S. Crooke
spellingShingle Fritz F. Parl
Kathleen M. Egan
Chun Li
Philip S. Crooke
Estrogen Exposure, Metabolism, and Enzyme Variants in a Model for Breast Cancer Risk Prediction
Cancer Informatics
author_facet Fritz F. Parl
Kathleen M. Egan
Chun Li
Philip S. Crooke
author_sort Fritz F. Parl
title Estrogen Exposure, Metabolism, and Enzyme Variants in a Model for Breast Cancer Risk Prediction
title_short Estrogen Exposure, Metabolism, and Enzyme Variants in a Model for Breast Cancer Risk Prediction
title_full Estrogen Exposure, Metabolism, and Enzyme Variants in a Model for Breast Cancer Risk Prediction
title_fullStr Estrogen Exposure, Metabolism, and Enzyme Variants in a Model for Breast Cancer Risk Prediction
title_full_unstemmed Estrogen Exposure, Metabolism, and Enzyme Variants in a Model for Breast Cancer Risk Prediction
title_sort estrogen exposure, metabolism, and enzyme variants in a model for breast cancer risk prediction
publisher SAGE Publishing
series Cancer Informatics
issn 1176-9351
publishDate 2009-01-01
description Estrogen is a well-known risk factor for breast cancer. Current models of breast cancer risk prediction are based on cumulative estrogen exposure but do not directly reflect mammary estrogen metabolism or address genetic variability between women in exposure to carcinogenic estrogen metabolites. We are proposing a mathematical model that forecasts breast cancer risk for a woman based on three factors: (1) estimated estrogen exposure, (2) kinetic analysis of the oxidative estrogen metabolism pathway in the breast, and (3) enzyme genotypes responsible for inherited differences in the production of carcinogenic metabolites. The model incorporates the main components of mammary estrogen metabolism, i.e. the conversion of 17β-estradiol ( E 2 ) by the phase I and II enzymes cytochrome P450 ( CYP ) 1A1 and 1B1 , catechol-O-methyltransferase ( COMT ), and glutathione S-transferase P1 ( GSTP1 ) into reactive metabolites, including catechol estrogens and estrogen quinones, such as E 2 -3,4- Q which can damage DNA. Each of the four genes is genotyped and the SNP data used to derive the haplotype configuration for each subject. The model then utilizes the kinetic and genotypic data to calculate the amount of E 2 -3,4- Q carcinogen as ultimate risk factor for each woman. The proposed model extends existing models by combining the traditional “phenotypic” measures of estrogen exposure with genotypic data associated with the metabolic fate of E 2 as determined by critical phase I and II enzymes. Instead of providing a general risk estimate our model would predict the risk for each individual woman based on her age, reproductive experiences as well as her genotypic profile.
url https://doi.org/10.4137/CIN.S2262
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