Detection of genetic variation and base modifications at base-pair resolution on both DNA and RNA

Wang et al. show how genetic sequence and base modifications can be detected simultaneously on single molecules of both DNA and RNA using magnetic tweezers. They also demonstrate an amplification-free CRISPR/Cas9-based strategy for isolating target regions from native DNA and apply this approach to...

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Main Authors: Zhen Wang, Jérôme Maluenda, Laurène Giraut, Thibault Vieille, Andréas Lefevre, David Salthouse, Gaël Radou, Rémi Moulinas, Sandra Astete, Pol D’Avezac, Geoff Smith, Charles André, Jean-François Allemand, David Bensimon, Vincent Croquette, Jimmy Ouellet, Gordon Hamilton
Format: Article
Language:English
Published: Nature Publishing Group 2021-01-01
Series:Communications Biology
Online Access:https://doi.org/10.1038/s42003-021-01648-7
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spelling doaj-36f2d6c25b90460cab0986d3713e402b2021-01-31T16:16:34ZengNature Publishing GroupCommunications Biology2399-36422021-01-014111410.1038/s42003-021-01648-7Detection of genetic variation and base modifications at base-pair resolution on both DNA and RNAZhen Wang0Jérôme Maluenda1Laurène Giraut2Thibault Vieille3Andréas Lefevre4David Salthouse5Gaël Radou6Rémi Moulinas7Sandra Astete8Pol D’Avezac9Geoff Smith10Charles André11Jean-François Allemand12David Bensimon13Vincent Croquette14Jimmy Ouellet15Gordon Hamilton16Depixus SAS, 3/5 Impasse ReilleDepixus SAS, 3/5 Impasse ReilleDepixus SAS, 3/5 Impasse ReilleDepixus SAS, 3/5 Impasse ReilleDepixus SAS, 3/5 Impasse ReilleDepixus SAS, 3/5 Impasse ReilleDepixus SAS, 3/5 Impasse ReilleDepixus SAS, 3/5 Impasse ReilleDepixus SAS, 3/5 Impasse ReilleDepixus SAS, 3/5 Impasse ReilleDepixus SAS, 3/5 Impasse ReilleDepixus SAS, 3/5 Impasse ReilleLaboratoire de physique de L’École normale supérieure de Paris, CNRS, ENS, Université PSL, Sorbonne Université, Université de ParisLaboratoire de physique de L’École normale supérieure de Paris, CNRS, ENS, Université PSL, Sorbonne Université, Université de ParisLaboratoire de physique de L’École normale supérieure de Paris, CNRS, ENS, Université PSL, Sorbonne Université, Université de ParisDepixus SAS, 3/5 Impasse ReilleDepixus SAS, 3/5 Impasse ReilleWang et al. show how genetic sequence and base modifications can be detected simultaneously on single molecules of both DNA and RNA using magnetic tweezers. They also demonstrate an amplification-free CRISPR/Cas9-based strategy for isolating target regions from native DNA and apply this approach to the isolation of targets from E. coli and human genomic DNA.https://doi.org/10.1038/s42003-021-01648-7
collection DOAJ
language English
format Article
sources DOAJ
author Zhen Wang
Jérôme Maluenda
Laurène Giraut
Thibault Vieille
Andréas Lefevre
David Salthouse
Gaël Radou
Rémi Moulinas
Sandra Astete
Pol D’Avezac
Geoff Smith
Charles André
Jean-François Allemand
David Bensimon
Vincent Croquette
Jimmy Ouellet
Gordon Hamilton
spellingShingle Zhen Wang
Jérôme Maluenda
Laurène Giraut
Thibault Vieille
Andréas Lefevre
David Salthouse
Gaël Radou
Rémi Moulinas
Sandra Astete
Pol D’Avezac
Geoff Smith
Charles André
Jean-François Allemand
David Bensimon
Vincent Croquette
Jimmy Ouellet
Gordon Hamilton
Detection of genetic variation and base modifications at base-pair resolution on both DNA and RNA
Communications Biology
author_facet Zhen Wang
Jérôme Maluenda
Laurène Giraut
Thibault Vieille
Andréas Lefevre
David Salthouse
Gaël Radou
Rémi Moulinas
Sandra Astete
Pol D’Avezac
Geoff Smith
Charles André
Jean-François Allemand
David Bensimon
Vincent Croquette
Jimmy Ouellet
Gordon Hamilton
author_sort Zhen Wang
title Detection of genetic variation and base modifications at base-pair resolution on both DNA and RNA
title_short Detection of genetic variation and base modifications at base-pair resolution on both DNA and RNA
title_full Detection of genetic variation and base modifications at base-pair resolution on both DNA and RNA
title_fullStr Detection of genetic variation and base modifications at base-pair resolution on both DNA and RNA
title_full_unstemmed Detection of genetic variation and base modifications at base-pair resolution on both DNA and RNA
title_sort detection of genetic variation and base modifications at base-pair resolution on both dna and rna
publisher Nature Publishing Group
series Communications Biology
issn 2399-3642
publishDate 2021-01-01
description Wang et al. show how genetic sequence and base modifications can be detected simultaneously on single molecules of both DNA and RNA using magnetic tweezers. They also demonstrate an amplification-free CRISPR/Cas9-based strategy for isolating target regions from native DNA and apply this approach to the isolation of targets from E. coli and human genomic DNA.
url https://doi.org/10.1038/s42003-021-01648-7
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