The complete mitochondrial genome of Orancistrocerus aterrimus aterrimus and comparative analysis in the family Vespidae (Hymenoptera, Vespidae, Eumeninae)

To date, only one mitochondrial genome (mitogenome) in the Eumeninae has been reported in the world and this is the first report in China. The mitogenome of O. a. aterrimus is 17 972 bp long, and contains 38 genes, including 13 protein coding genes (PCGs), 23 tRNA genes, two rRNA g...

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Main Authors: Qiao-Hua Zhang, Pan Huang, Bin Chen, Ting-Jing Li
Format: Article
Language:English
Published: Pensoft Publishers 2018-10-01
Series:ZooKeys
Online Access:https://zookeys.pensoft.net/articles.php?id=25356
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spelling doaj-36ab018763ad42b7b10d4a655355c0372020-11-25T01:56:30ZengPensoft PublishersZooKeys1313-29891313-29702018-10-0179012714410.3897/zookeys.790.2535625356The complete mitochondrial genome of Orancistrocerus aterrimus aterrimus and comparative analysis in the family Vespidae (Hymenoptera, Vespidae, Eumeninae)Qiao-Hua Zhang0Pan Huang1Bin Chen2Ting-Jing Li3Chongqing Normal UniversityChongqing Normal UniversityChongqing Normal UniversityChongqing Normal University To date, only one mitochondrial genome (mitogenome) in the Eumeninae has been reported in the world and this is the first report in China. The mitogenome of O. a. aterrimus is 17 972 bp long, and contains 38 genes, including 13 protein coding genes (PCGs), 23 tRNA genes, two rRNA genes, a long non-coding region (NCR), and a control region (CR). The mitogenome has 79.43% A + T content, its 13 PCGs use ATN as the initiation codon except for cox1 using TTG, and nine genes used complete translation termination TAA and four genes have incomplete stop codon T (cox2, cox3, nad4, and cytb). Twenty-two of 23 tRNAs can form the typical cloverleaf secondary structure except for trnS1. The CR is 1 078 bp long with 84.69% A+T content, comprising 28 bp tandem repeat sequences and 13 bp T-strech. There are two gene rearrangements which are an extra trnM2 located between trnQ and nad2 and the trnL2 in the upstream of nad1. Within all rearrangements of these mitogenomes reported in the family Vespidae, the translocation between trnS1 and trnE genes only appears in Vespinae, and the translocation of trnY in Polistinae and Vespinae. The absent codons of 13 PCGs in Polistinae are more than those both in Vespinae and Eumeninae in the family Vespidae. The study reports the complete mitogenome of O. a. aterrimus, compares the characteristics and construct phylogenetic relationships of the mitogenomes in the family Vespidae. https://zookeys.pensoft.net/articles.php?id=25356
collection DOAJ
language English
format Article
sources DOAJ
author Qiao-Hua Zhang
Pan Huang
Bin Chen
Ting-Jing Li
spellingShingle Qiao-Hua Zhang
Pan Huang
Bin Chen
Ting-Jing Li
The complete mitochondrial genome of Orancistrocerus aterrimus aterrimus and comparative analysis in the family Vespidae (Hymenoptera, Vespidae, Eumeninae)
ZooKeys
author_facet Qiao-Hua Zhang
Pan Huang
Bin Chen
Ting-Jing Li
author_sort Qiao-Hua Zhang
title The complete mitochondrial genome of Orancistrocerus aterrimus aterrimus and comparative analysis in the family Vespidae (Hymenoptera, Vespidae, Eumeninae)
title_short The complete mitochondrial genome of Orancistrocerus aterrimus aterrimus and comparative analysis in the family Vespidae (Hymenoptera, Vespidae, Eumeninae)
title_full The complete mitochondrial genome of Orancistrocerus aterrimus aterrimus and comparative analysis in the family Vespidae (Hymenoptera, Vespidae, Eumeninae)
title_fullStr The complete mitochondrial genome of Orancistrocerus aterrimus aterrimus and comparative analysis in the family Vespidae (Hymenoptera, Vespidae, Eumeninae)
title_full_unstemmed The complete mitochondrial genome of Orancistrocerus aterrimus aterrimus and comparative analysis in the family Vespidae (Hymenoptera, Vespidae, Eumeninae)
title_sort complete mitochondrial genome of orancistrocerus aterrimus aterrimus and comparative analysis in the family vespidae (hymenoptera, vespidae, eumeninae)
publisher Pensoft Publishers
series ZooKeys
issn 1313-2989
1313-2970
publishDate 2018-10-01
description To date, only one mitochondrial genome (mitogenome) in the Eumeninae has been reported in the world and this is the first report in China. The mitogenome of O. a. aterrimus is 17 972 bp long, and contains 38 genes, including 13 protein coding genes (PCGs), 23 tRNA genes, two rRNA genes, a long non-coding region (NCR), and a control region (CR). The mitogenome has 79.43% A + T content, its 13 PCGs use ATN as the initiation codon except for cox1 using TTG, and nine genes used complete translation termination TAA and four genes have incomplete stop codon T (cox2, cox3, nad4, and cytb). Twenty-two of 23 tRNAs can form the typical cloverleaf secondary structure except for trnS1. The CR is 1 078 bp long with 84.69% A+T content, comprising 28 bp tandem repeat sequences and 13 bp T-strech. There are two gene rearrangements which are an extra trnM2 located between trnQ and nad2 and the trnL2 in the upstream of nad1. Within all rearrangements of these mitogenomes reported in the family Vespidae, the translocation between trnS1 and trnE genes only appears in Vespinae, and the translocation of trnY in Polistinae and Vespinae. The absent codons of 13 PCGs in Polistinae are more than those both in Vespinae and Eumeninae in the family Vespidae. The study reports the complete mitogenome of O. a. aterrimus, compares the characteristics and construct phylogenetic relationships of the mitogenomes in the family Vespidae.
url https://zookeys.pensoft.net/articles.php?id=25356
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